PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728031.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 417aa MW: 47040.4 Da PI: 4.8907

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	49	1.4e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +grWT+eEde+l ++++ G g+W++ ++ g+ R++k+c++rw +yl XP_022728031.1 14 KGRWTAEEDEILTKYIQANGEGSWRSLPKNAGLPRCGKSCRLRWINYL 61 79****************************99**********97 PP
2	Myb_DNA-binding	53	8e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+ T +E+e+++++++ lG++ W++Ia++++ gRt++++k++w+++l XP_022728031.1 67 RGNITVDEEEIIIHLHATLGNR-WSLIASHLP-GRTDNEIKNYWNSHL 112 7899****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 417 aa Download sequence
MGRAPCCEKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLPRCG KSCRLRWINY 60 LRADLKRGNI TVDEEEIIIH LHATLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIDSFR 120 RPSSQSLPVI MEINKDGIAK QKGGRTSRWA IKKNKSNSTQ KRAGSCSNKP MENVSVNGVV 180 PLPSTLMLEK ETLFNTAIED RMALDPYEED KERMIPVILS PRQDTGEGMM GSSEERESLV 240 LSSGEERTIE NSMHCASGKV EKETDILATF ESIESSGILC FDDIMDNELL HPNGDLTLLS 300 EWRENNITVT VDEKENSGNL SPNKTAANNE EIESGNSSGD SGNWNSSSSM TSFDNYNLDN 360 LDWVWESVVQ GNELWDDKGC MSSWLWESDC NGKGERHKSE DRKDFKSQNS TVDWLFF

Sequence ? help Back to Top

Protein Sequence Length: 417 aa Download sequence

MGRAPCCEKV GLKKGRWTAE EDEILTKYIQ ANGEGSWRSL PKNAGLPRCG KSCRLRWINY  60
LRADLKRGNI TVDEEEIIIH LHATLGNRWS LIASHLPGRT DNEIKNYWNS HLSRKIDSFR  120
RPSSQSLPVI MEINKDGIAK QKGGRTSRWA IKKNKSNSTQ KRAGSCSNKP MENVSVNGVV  180
PLPSTLMLEK ETLFNTAIED RMALDPYEED KERMIPVILS PRQDTGEGMM GSSEERESLV  240
LSSGEERTIE NSMHCASGKV EKETDILATF ESIESSGILC FDDIMDNELL HPNGDLTLLS  300
EWRENNITVT VDEKENSGNL SPNKTAANNE EIESGNSSGD SGNWNSSSSM TSFDNYNLDN  360
LDWVWESVVQ GNELWDDKGC MSSWLWESDC NGKGERHKSE DRKDFKSQNS TVDWLFF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G47460.1	1e-76	MYB family protein