PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728032.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 254aa MW: 29133.9 Da PI: 9.0101

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728032.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.8	1.2e-18	16	63	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT++Ed+ll ++v++ G g+W+++ar g++R++k+c++rw +yl XP_022728032.1 16 KGPWTPQEDKLLTEYVNLNGEGRWSSVARSAGLNRSGKSCRLRWVNYL 63 79********************************************97 PP
2	Myb_DNA-binding	50.8	3.8e-16	69	113	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg T++E+ +++++++ +G++ W+tIar+++ gRt++++k++w+++ XP_022728032.1 69 RGHLTPQEEGIIIELHAHWGNK-WSTIARYLP-GRTDNEIKNYWRTH 113 6778****************.*****.**********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 254 aa Download sequence
MIGMMGWEAP KQEWRKGPWT PQEDKLLTEY VNLNGEGRWS SVARSAGLNR SGKSCRLRWV 60 NYLRPGLKRG HLTPQEEGII IELHAHWGNK WSTIARYLPG RTDNEIKNYW RTHFKKKERS 120 SQKQEKRKAQ ILKLKQQQQQ EEEKLPQPDK DQTEAGGDGK VISQVADLAQ GKQEMVFMYP 180 TIRDQCLPVM SQEAAASWLD QFLVDEGLWA GGLWNLDDQQ PGYCNKVAMQ NQATTYNSFG 240 GDAINLYNGG GYIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G30210.1	9e-66	MYB family protein