PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728107.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 293aa    MW: 33836.9 Da    PI: 7.4333
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding61.61.6e-192370148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd  l+ +v+ +G g+W+++ar  g++Rt+k+c++rw++yl
   XP_022728107.1 23 KGPWTEEEDSMLKAYVNIHGEGRWNSVARLSGLKRTGKSCRLRWLNYL 70
                     79********************************************97 PP
2Myb_DNA-binding49.21.2e-1576119146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ + eE++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_022728107.1  76 RGSISLEEQLLILELHSLWGNR-WSKIAQHLP-GRTDNEIKNYWRT 119
                      678899****************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 293 aa     Download sequence    
MDVYERGFKS EAPQSEKEMD VRKGPWTEEE DSMLKAYVNI HGEGRWNSVA RLSGLKRTGK  60
SCRLRWLNYL RPEVRRGSIS LEEQLLILEL HSLWGNRWSK IAQHLPGRTD NEIKNYWRTR  120
VQKKAKQLKC DVNGKEFRDT MRYVWIPRLM ERIRATSEFP SGQPSSTTYM ESISNLTTSQ  180
IGYANSTGSV QFDSRLLPEL SGTLSDSRDT QVSSVSDLTD SYNAKSVSNY PNNLQKSSVL  240
CPENLAGMWG RDDGKFRATE EQRIGWLGGG DSMENLWNEE NIWFLQQQLY DEI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G49620.15e-76MYB family protein