PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728193.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 210aa    MW: 22989.2 Da    PI: 8.2075
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728193.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF2601284.3e-40191201101
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 
                     +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p ++r +a+ +++yeA+ar+rdPvyG+v++i++lqqq++ l+a+l
  XP_022728193.1  19 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKVFGASNVSKLLLHIPAHDRCEAVVTIAYEAQARIRDPVYGCVAHIFALQQQVAWLQAQL 113
                     7*************************99******************************************************************* PP

          DUF260  95 allkeel 101
                      ++k++l
  XP_022728193.1 114 MQVKAQL 120
                     9999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MASSGSCSGT GTATGTGSPC GACKFLRRKC ASDCIFAPYF CSEQGPARFA AIHKVFGASN  60
VSKLLLHIPA HDRCEAVVTI AYEAQARIRD PVYGCVAHIF ALQQQVAWLQ AQLMQVKAQL  120
AQNVMNSHNI QSQWQGNLPG VPSFPTYASY MNPISPQSSL ESVELNSADS MNMQEVQSRE  180
EFSFQGYPKK RPYNSDLGEL QALALRMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.14e-60LBD family protein