PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728309.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 514aa    MW: 57348.2 Da    PI: 5.8666
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728309.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS354.22e-1081545091374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg.dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                     l+ lLlecA a+s ++l +a+++L +l ++asp++ +  +R++ayf++A+++r+ +s+ ++++ l   +       ++  a+++f++vsP++kf+
  XP_022728309.1 154 LIALLLECAVAISVDNLGEAHRMLLELTQMASPYAlSCAERVVAYFAKAMSSRVINSCLGICSPLINYN-------SVHCAFQAFNNVSPFIKFA 241
                     5789*******************************999******************8888886554333.......3457889************ PP

            GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     h+t NqaIlea+++ +rvHiiD+di+qGlQWpaL++ La+R egpp++R+Tg+gs    s e + etg++L++fA++lg++fef++ +a+++ ++
  XP_022728309.1 242 HFTSNQAILEAFHRRDRVHIIDLDIMQGLQWPALFHILATRIEGPPHVRMTGMGS----SMELVVETGKQLSNFAKRLGMSFEFHP-IATKFGEI 331
                     *******************************************************....9**************************.79****** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     ++ + +v++gE+la+++    h+l+d +++  +    +L+l+ +l P+v+++veq+++h ++sFl+rf+ +l+yys++fdslea lp+++  r+ 
  XP_022728309.1 332 DITMVQVQRGETLAIHWLQ--HSLYDATGPDWK----TLRLLEQLAPRVITLVEQDLSH-GGSFLDRFVGSLHYYSTMFDSLEAYLPADDPSRHH 419
                     ******************9..999999999888....**********************.789******************************** PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E+ ll rei n++a  g +r  +  ++ +Wr+ l ++ F +vp+s++ ++qa+l+l++++  +gy++ + +g+l lgWkd  L+++SaW+
  XP_022728309.1 420 IEQCLLYREINNILAIGGPARSGED-KFTHWRSELARSCFVQVPMSSNSMAQAQLILNMFPpAHGYSLVQGDGTLRLGWKDTGLFTASAWT 509
                     ********************77665.5***************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 514 aa     Download sequence    
MMKGGFEVVH ATLDKIQPHL EPIWDFASLG FPTTSSTLTS VSSIPRQTVE NRCINLERNE  60
LSEWVEQVTK QLIDDLPSVE TRTDHSSSLQ ADISMVCEDN FAPSMLGDFR PRKTVRGSFL  120
DGSCGEELQW GNELGNQTNN VWENGGNAEQ GLSLIALLLE CAVAISVDNL GEAHRMLLEL  180
TQMASPYALS CAERVVAYFA KAMSSRVINS CLGICSPLIN YNSVHCAFQA FNNVSPFIKF  240
AHFTSNQAIL EAFHRRDRVH IIDLDIMQGL QWPALFHILA TRIEGPPHVR MTGMGSSMEL  300
VVETGKQLSN FAKRLGMSFE FHPIATKFGE IDITMVQVQR GETLAIHWLQ HSLYDATGPD  360
WKTLRLLEQL APRVITLVEQ DLSHGGSFLD RFVGSLHYYS TMFDSLEAYL PADDPSRHHI  420
EQCLLYREIN NILAIGGPAR SGEDKFTHWR SELARSCFVQ VPMSSNSMAQ AQLILNMFPP  480
AHGYSLVQGD GTLRLGWKDT GLFTASAWTS HASR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54220.11e-144GRAS family protein