PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728327.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 617aa    MW: 67541.2 Da    PI: 4.8354
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728327.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS458.63.9e-1402446061374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     lv++L++cAeav++++l+la+ l++++  la+++  +m+++a+yf+eALa+r++r    +y    p+++ + + ++ l++   f+e++P+lkf+h
  XP_022728327.1 244 LVHALMACAEAVQQDNLKLADVLVKHMGLLAASQSGAMRKVATYFAEALARRIYR----IY----PQDSLDPSYTDILQM--HFYETCPYLKFAH 328
                     689****************************************************....44....444433234444433..5************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     +taNqaIlea+++++rvH+iDf+++qG+QWpaL+qaLa Rp+gpp +R+Tg+g+p+++++++l+++g++La++Ae +gv+fef+ +va++l+dle
  XP_022728327.1 329 FTANQAILEAFATANRVHVIDFGLKQGMQWPALMQALALRPGGPPAFRLTGIGPPQPDNTDALQQVGWKLAQLAEIIGVEFEFRGFVANSLADLE 423
                     *********************************************************************************************** PP

            GRAS 191 leeLrvkp..gEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +e+L+++p   Ea+aVn+v++lhrll++++ +e+    vL+ +k ++Pk+++vveqea+hn++ Fl+rf+eal+yys+lfdsle + ++  +++ 
  XP_022728327.1 424 PEMLEIQPpeVEAVAVNSVFELHRLLARPGGIEK----VLSSIKAMKPKILTVVEQEANHNGQVFLDRFTEALHYYSSLFDSLEGSGAAPPSQDL 514
                     ********9999*********************9....*********************************************999888899*** PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     ++++ +lgr+i+nvvaceg +r+erhetl +Wr+r+e+aGF+pv+l+++a+kqa++ll+ ++ +dgyrvee +g+l+lgW++rpL+++SaW+
  XP_022728327.1 515 VMSELYLGRQICNVVACEGMDRVERHETLIQWRNRMETAGFSPVHLGSNAYKQASMLLALFAgGDGYRVEETDGCLMLGWHTRPLITTSAWQ 606
                     *******************************************************************************************6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 617 aa     Download sequence    
MLSRKRIMKR DHEEIYGATG YGSGSGAKAE SSSIGNPDKG KLWEEEQDAG GMDELLAVLG  60
YKVRSSEMAD VAQKLEQLEM VLGTAQEDGI SHLSCDSIHY NPSDLSGWVQ SMLTELNNPA  120
TSNLDPVLAN SDSNSSILGQ INHSEPSKAQ YQQQIVVSNQ SQVYSDDSEY DLRAIPGVAA  180
YPPPKSKSDL ESTRKRMKTS IGSSGSTGYG SSSSSPQEIE VSGAVTESTR PVVLIDSQET  240
GVRLVHALMA CAEAVQQDNL KLADVLVKHM GLLAASQSGA MRKVATYFAE ALARRIYRIY  300
PQDSLDPSYT DILQMHFYET CPYLKFAHFT ANQAILEAFA TANRVHVIDF GLKQGMQWPA  360
LMQALALRPG GPPAFRLTGI GPPQPDNTDA LQQVGWKLAQ LAEIIGVEFE FRGFVANSLA  420
DLEPEMLEIQ PPEVEAVAVN SVFELHRLLA RPGGIEKVLS SIKAMKPKIL TVVEQEANHN  480
GQVFLDRFTE ALHYYSSLFD SLEGSGAAPP SQDLVMSELY LGRQICNVVA CEGMDRVERH  540
ETLIQWRNRM ETAGFSPVHL GSNAYKQASM LLALFAGGDG YRVEETDGCL MLGWHTRPLI  600
TTSAWQLSNT ELTRELS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.10.0GRAS family protein