PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728341.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 640aa MW: 69185.8 Da PI: 5.6736

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728341.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	95.6	3.3e-30	362	420	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gC v+k+v+r+aed +++++tYeg+Hnh+ XP_022728341.1 362 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAaGCAVRKQVQRCAEDRTILITTYEGNHNHP 420 7*************************99**************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 640 aa Download sequence
MAKASGLSID LDPPFSLFLH HPTVLNSFPE DKTDNNVVKN PKYRSKIVFP ATTPMDDVTS 60 AKTSPPPTIQ FPVYLNCSRD QHPSFPSDDK RSVVGEMDFF AEKDNKLVDD HDRIDDGDAN 120 PIHTSDTDIK DSTDRTVLEM INVNTGLNLL TTNTSSNQSI VDDGISSNME DKKAENELSV 180 LQAELRRMNA ENQRLKEMLS QVTSSYNTVQ MRLLTLMQQQ HDGKTEKAEE QDQTMEEKVE 240 QKKPNGGLIV PRQFMDLGLA AAAAADTDEP SLSSSEERSQ DPSGSPNNNT EVASKEFGLR 300 KRGNGEEGKG TAREDSLDQG SQGWGANKVP RLNSSKNVDQ TEATMRKARV SVRARSEAPM 360 ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCAVRKQVQ RCAEDRTILI TTYEGNHNHP 420 LPPAAMAMAS TTSSAARMLL SGSMSSADGL LNSNFLTRTI LPCSSSMATI SASAPFPTVT 480 LDLTQTPNPL QFAKPPGQFQ VPFPNPPQNL ANSPDALLPQ IFGQALYNQS KFSGLQMSQD 540 MEQPQSGHQL QHGQQKSLAD TVNAATVNAA TAAIAADPNF TAALAAAITS IIGNSHPNNV 600 PNNNGNNLTS ATNSSGNVAT TSNSNSNGNN KINNSCFAAN

Sequence ? help Back to Top

Protein Sequence Length: 640 aa Download sequence

MAKASGLSID LDPPFSLFLH HPTVLNSFPE DKTDNNVVKN PKYRSKIVFP ATTPMDDVTS  60
AKTSPPPTIQ FPVYLNCSRD QHPSFPSDDK RSVVGEMDFF AEKDNKLVDD HDRIDDGDAN  120
PIHTSDTDIK DSTDRTVLEM INVNTGLNLL TTNTSSNQSI VDDGISSNME DKKAENELSV  180
LQAELRRMNA ENQRLKEMLS QVTSSYNTVQ MRLLTLMQQQ HDGKTEKAEE QDQTMEEKVE  240
QKKPNGGLIV PRQFMDLGLA AAAAADTDEP SLSSSEERSQ DPSGSPNNNT EVASKEFGLR  300
KRGNGEEGKG TAREDSLDQG SQGWGANKVP RLNSSKNVDQ TEATMRKARV SVRARSEAPM  360
ITDGCQWRKY GQKMAKGNPC PRAYYRCTMA AGCAVRKQVQ RCAEDRTILI TTYEGNHNHP  420
LPPAAMAMAS TTSSAARMLL SGSMSSADGL LNSNFLTRTI LPCSSSMATI SASAPFPTVT  480
LDLTQTPNPL QFAKPPGQFQ VPFPNPPQNL ANSPDALLPQ IFGQALYNQS KFSGLQMSQD  540
MEQPQSGHQL QHGQQKSLAD TVNAATVNAA TAAIAADPNF TAALAAAITS IIGNSHPNNV  600
PNNNGNNLTS ATNSSGNVAT TSNSNSNGNN KINNSCFAAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-115	WRKY family protein