PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728355.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YB
Protein Properties Length: 214aa    MW: 21966.2 Da    PI: 7.5696
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728355.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB186.61.9e-5825120297
           NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 
                     reqdrflPianvsrimkk+lPanakiskdaketvqecvsefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl+kyre+ege
  XP_022728355.1  25 REQDRFLPIANVSRIMKKALPANAKISKDAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEEYVEPLKIYLQKYREMEGE 119
                     89********************************************************************************************9 PP

           NF-YB  97 k 97 
                     k
  XP_022728355.1 120 K 120
                     7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
MADSDNESGG HNNSGGNAYR ETSAREQDRF LPIANVSRIM KKALPANAKI SKDAKETVQE  60
CVSEFISFIT GEASDKCQRE KRKTINGDDL LWAMTTLGFE EYVEPLKIYL QKYREMEGEK  120
SSMGRGEKDG ASGGSAGGSS SGGGAAGGGS AGTGGLGPGG GTGFNGGGSM YGGMMMMGHH  180
QGNLYGSGGF HQQMSVGKGG APTTASGGAA LRSR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.19e-68NF-YB family protein