PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728419.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 487aa MW: 53495.6 Da PI: 5.0758

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728419.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.5	1.7e-34	262	316	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_022728419.1 262 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 316 79****************************************************8 PP
2	Myb_DNA-binding	57	4.6e-18	264	315	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ XP_022728419.1 264 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 315 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 487 aa Download sequence
MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP 60 LVHATRVPTN SEVVGHMFSS SSGFSSDLQY SSASPHEKLL RNTPFISQSP TNAAALPLPQ 120 SSNSALPQST ISSHYNKENS GSWSTDPGFL DFPVSTPVQS SQVESSSCSG IMTSEDLSKR 180 NDWQEWADQL ISDDEALASN WNELLVDNNV MDLEPKMAYQ VAKPCTTIAA QKPQVHQQLP 240 SPSIESRSVV NPSSSTNNAP AKPRMRWTPE LHEAFVEAVN QLGGSERATP KGVLKLMKVE 300 GLTIYHVKSH LQKYRTARYR PESSEGSSEK KLTPIEDISS LDLKTGMGIT EALRLQMEVQ 360 KRLHEQLEIQ RNLQLRIEEQ GRYLQMMFEN QKSGLDKLKV SSSNLENPPT LSSDATKESP 420 AKNELEASQM DNVNSGTDPV NANSILEVSS QEMGGEKKAP ETGDLEKAES CVSELSSQPS 480 KRPRFEE

Sequence ? help Back to Top

Protein Sequence Length: 487 aa Download sequence

MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP  60
LVHATRVPTN SEVVGHMFSS SSGFSSDLQY SSASPHEKLL RNTPFISQSP TNAAALPLPQ  120
SSNSALPQST ISSHYNKENS GSWSTDPGFL DFPVSTPVQS SQVESSSCSG IMTSEDLSKR  180
NDWQEWADQL ISDDEALASN WNELLVDNNV MDLEPKMAYQ VAKPCTTIAA QKPQVHQQLP  240
SPSIESRSVV NPSSSTNNAP AKPRMRWTPE LHEAFVEAVN QLGGSERATP KGVLKLMKVE  300
GLTIYHVKSH LQKYRTARYR PESSEGSSEK KLTPIEDISS LDLKTGMGIT EALRLQMEVQ  360
KRLHEQLEIQ RNLQLRIEEQ GRYLQMMFEN QKSGLDKLKV SSSNLENPPT LSSDATKESP  420
AKNELEASQM DNVNSGTDPV NANSILEVSS QEMGGEKKAP ETGDLEKAES CVSELSSQPS  480
KRPRFEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-103	G2-like family protein