PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728421.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 456aa MW: 50140 Da PI: 5.2441

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728421.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.7	1.5e-34	231	285	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_022728421.1 231 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 285 79****************************************************8 PP
2	Myb_DNA-binding	57.1	4.2e-18	233	284	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ XP_022728421.1 233 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 284 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP 60 LVHATRVPTN SEVVGHMFSS SSGFSSDLQY SSASPHEKLL RNTPFISQSP TNAAALPLPQ 120 SSNSALPQST ISSHYNKENS GSWSTDPGFL DFPEWADQLI SDDEALASNW NELLVDNNVM 180 DLEPKMAYQV AKPCTTIAAQ KPQVHQQLPS PSIESRSVVN PSSSTNNAPA KPRMRWTPEL 240 HEAFVEAVNQ LGGSERATPK GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSSEKK 300 LTPIEDISSL DLKTGMGITE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG RYLQMMFENQ 360 KSGLDKLKVS SSNLENPPTL SSDATKESPA KNELEASQMD NVNSGTDPVN ANSILEVSSQ 420 EMGGEKKAPE TGDLEKAESC VSELSSQPSK RPRFEE

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP  60
LVHATRVPTN SEVVGHMFSS SSGFSSDLQY SSASPHEKLL RNTPFISQSP TNAAALPLPQ  120
SSNSALPQST ISSHYNKENS GSWSTDPGFL DFPEWADQLI SDDEALASNW NELLVDNNVM  180
DLEPKMAYQV AKPCTTIAAQ KPQVHQQLPS PSIESRSVVN PSSSTNNAPA KPRMRWTPEL  240
HEAFVEAVNQ LGGSERATPK GVLKLMKVEG LTIYHVKSHL QKYRTARYRP ESSEGSSEKK  300
LTPIEDISSL DLKTGMGITE ALRLQMEVQK RLHEQLEIQR NLQLRIEEQG RYLQMMFENQ  360
KSGLDKLKVS SSNLENPPTL SSDATKESPA KNELEASQMD NVNSGTDPVN ANSILEVSSQ  420
EMGGEKKAPE TGDLEKAESC VSELSSQPSK RPRFEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	5e-96	G2-like family protein