PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728423.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

G2-like

Protein Properties

Length: 452aa MW: 49683.4 Da PI: 4.9182

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728423.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	109.7	1.5e-34	227	281	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 kpr+rWtpeLHe+Fveav+qLGGse+AtPk +l+lmkv+gLt++hvkSHLQkYR+ XP_022728423.1 227 KPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRT 281 79****************************************************8 PP
2	Myb_DNA-binding	57.1	4.1e-18	229	280	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e +v+av+qlGg t+k + + m +g+t +++ks++qky+ XP_022728423.1 229 RMRWTPELHEAFVEAVNQLGGSeraTPKGVLKLMKvEGLTIYHVKSHLQKYR 280 89****************99***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 452 aa Download sequence
MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP 60 LVHATRVPTN SEVSPTNAAA LPLPQSSNSA LPQSTISSHY NKENSGSWST DPGFLDFPVS 120 TPVQSSQVES SSCSGIMTSE DLSKRNDWQE WADQLISDDE ALASNWNELL VDNNVMDLEP 180 KMAYQVAKPC TTIAAQKPQV HQQLPSPSIE SRSVVNPSSS TNNAPAKPRM RWTPELHEAF 240 VEAVNQLGGS ERATPKGVLK LMKVEGLTIY HVKSHLQKYR TARYRPESSE GSSEKKLTPI 300 EDISSLDLKT GMGITEALRL QMEVQKRLHE QLEIQRNLQL RIEEQGRYLQ MMFENQKSGL 360 DKLKVSSSNL ENPPTLSSDA TKESPAKNEL EASQMDNVNS GTDPVNANSI LEVSSQEMGG 420 EKKAPETGDL EKAESCVSEL SSQPSKRPRF EE

Sequence ? help Back to Top

Protein Sequence Length: 452 aa Download sequence

MEAQPSLSIQ RSGARQPSNL GVSGGMTSSL PAISTHLEET YLKLPDTQPV SAERELMTRP  60
LVHATRVPTN SEVSPTNAAA LPLPQSSNSA LPQSTISSHY NKENSGSWST DPGFLDFPVS  120
TPVQSSQVES SSCSGIMTSE DLSKRNDWQE WADQLISDDE ALASNWNELL VDNNVMDLEP  180
KMAYQVAKPC TTIAAQKPQV HQQLPSPSIE SRSVVNPSSS TNNAPAKPRM RWTPELHEAF  240
VEAVNQLGGS ERATPKGVLK LMKVEGLTIY HVKSHLQKYR TARYRPESSE GSSEKKLTPI  300
EDISSLDLKT GMGITEALRL QMEVQKRLHE QLEIQRNLQL RIEEQGRYLQ MMFENQKSGL  360
DKLKVSSSNL ENPPTLSSDA TKESPAKNEL EASQMDNVNS GTDPVNANSI LEVSSQEMGG  420
EKKAPETGDL EKAESCVSEL SSQPSKRPRF EE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G28610.1	1e-105	G2-like family protein