PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728549.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 116aa    MW: 13626.5 Da    PI: 10.6892
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728549.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF49.74.7e-162959232
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCd 32
                    + e+ks+rqvtfskRr g++ KA+ELS+LC+
  XP_022728549.1 29 KLEDKSKRQVTFSKRRRGLFNKAKELSTLCG 59
                    679***************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 116 aa     Download sequence    
MEDNALISNA TEAKKTRRSR GRQRIEIKKL EDKSKRQVTF SKRRRGLFNK AKELSTLCGG  60
RKARVEELSI QKSTCLWHYV ADQELNKAQF LQQLMVGGNY DWCRNSDNFT LVEHRH
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.16e-14M-type_MADS family protein