PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728552.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family M-type_MADS
Protein Properties Length: 170aa    MW: 19533.1 Da    PI: 6.8463
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728552.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF64.89.3e-212974247
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgkly 47
                    + e++s+rqvtfskRr g++ KA+ELS+LC++ev ++ +s++g++y
  XP_022728552.1 29 KLEDESKRQVTFSKRRRGLFNKAKELSTLCGVEVGILTLSKSGRVY 74
                    6799****************************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 170 aa     Download sequence    
MEDSVLMSNV TEAKKTRSSR GRQRIEIKKL EDESKRQVTF SKRRRGLFNK AKELSTLCGV  60
EVGILTLSKS GRVYSNDNVE AVLDRYLAES SGQGNYSLIK QKEVKEDISG GFWLDQPIEN  120
MGLVELLEYA MALNDLRKNV EARVEELSIQ KSTYLWQYVA DQELNKDRDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72350.16e-29M-type_MADS family protein