PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728695.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family WOX
Protein Properties Length: 327aa    MW: 37379.7 Da    PI: 8.2143
Description WOX family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728695.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox63.43.2e-20666257
                    T--SS--HHHHHHHHHHHHH.SSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  2 rkRttftkeqleeLeelFek.nrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    ++R+++t+eql +Lee++++  r+p+a+++++++++l    +++ ++V++WFqN++a++++
  XP_022728695.1  6 STRWCPTPEQLMILEEMYRSgIRTPNASQIQQITSHLsfygKIEGKNVFYWFQNHKARDRQ 66
                    58*****************99*************************************996 PP
2Wus_type_Homeobox120.66.5e-39567264
  Wus_type_Homeobox  2 artRWtPtpeQikiLeelyksGlrtPnkeeiqritaeLeeyGkiedkNVfyWFQNrkaRerqk 64
                       a+tRW+PtpeQ++iLee+y+sG+rtPn+++iq+it++L+ yGkie+kNVfyWFQN+kaR+rqk
     XP_022728695.1  5 ASTRWCPTPEQLMILEEMYRSGIRTPNASQIQQITSHLSFYGKIEGKNVFYWFQNHKARDRQK 67
                       689***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 327 aa     Download sequence    
MSPAASTRWC PTPEQLMILE EMYRSGIRTP NASQIQQITS HLSFYGKIEG KNVFYWFQNH  60
KARDRQKLRR KLTKQLQLQQ QLYHQHQLQQ NHPNHHSLHY DSPASPAFQH LSYYNSACLF  120
PQVGAHENAA AQQVMNYTWK FDIPERVDMD KATMRMIGSD WLMMVDLGPL SSQCNNSTTR  180
PPLKTLELFP VTASNLKEEC NNSSSEPLSC TTTKSTPAKY YYFLPINLDS FLLVFLKARI  240
FISAAPVIDG HLDIPDFELG VSSVDSCMNS FSAGRFVVQR KLFLCNAFNF CTNVLGKETK  300
KEKVMNAMPL ASGFDGLELD WFWVGLN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28610.18e-39WOX family protein