PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728763.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 261aa    MW: 28745.8 Da    PI: 9.728
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728763.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA57.22.2e-18207243135
            GATA   1 Cs..nCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C+  nC+t +Tp+WR+gp g+ktLCnaCG++yrk+++
  XP_022728763.1 207 CTnyNCNTNDTPMWRKGPLGPKTLCNACGIKYRKEEE 243
                     55559*****************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MDNSQWFNQV AARMNNHNNV GDRVDLTLKL GLPNSDQNPV PYQLRPHVSP ASMAPGHLAN  60
LSFAGPNTQG MNQMGMFNQG AMVQGQQSFN GSQYAWPTDQ IVSNVHNMNY ANAFNQCCSP  120
SLGFPSYNST NSYNNFGPTH PPPPPHHHQL PAPSLVPSNI YTLIDVPPRR AANQHQLELG  180
SSSGSSSGKQ RQRRQRGGNY NDPNKRCTNY NCNTNDTPMW RKGPLGPKTL CNACGIKYRK  240
EEEKRRAKEA GSSGQQSNPN G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20750.18e-16GATA family protein