PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728790.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 243aa MW: 27858.8 Da PI: 9.0419

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728790.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	99.5	1.3e-31	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krienk+nrqvtf+kRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s XP_022728790.1 9 KRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIVFSNRGKLYEFCS 59 79***********************************************96 PP
2	K-box	98	1.4e-32	82	173	9	100
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 ++ ++++ ++qe+ kLk+++e Lqr+qR+llGe+L++L+ k+L+qLe+qLe+slk+iRs+K++ +l+q+ +lqk+e++l e+nk++r+klee XP_022728790.1 82 QSIRETQASYQEYLKLKARVEVLQRSQRNLLGEELGPLNTKDLEQLENQLETSLKQIRSTKTQAMLDQLGDLQKREQMLVEANKSMRRKLEE 173 667789***********************************************************************************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MGRGRVELKR IENKINRQVT FAKRRNGLLK KAYELSVLCD AEVALIVFSN RGKLYEFCSS 60 SSMMKTLEKY RKCSYSTLDT AQSIRETQAS YQEYLKLKAR VEVLQRSQRN LLGEELGPLN 120 TKDLEQLENQ LETSLKQIRS TKTQAMLDQL GDLQKREQML VEANKSMRRK LEELSAQVPL 180 QLAWETGEQI IPNNHLQAQS EAFFQPLVGN SSLQIGYNPV FSDEMDVAGH NQNVSGYFPG 240 WML

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G02310.1	1e-105	MIKC_MADS family protein