PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022728796.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MIKC_MADS
Protein Properties Length: 308aa    MW: 35859.9 Da    PI: 8.2738
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022728796.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF96.21.4e-3072122151
                     S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF   1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                     krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++g+l+eys+
  XP_022728796.1  72 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTRGHLFEYST 122
                     79***********************************************96 PP
2K-box105.56.4e-351402373100
           K-box   3 kssgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 
                     +++  ++e +++ s++ e+akLk+++e Lqr+qRh++GedLe+Lsl+eLq+LeqqL+++lk++RskKn+l++e+i+elqkk k+lqe+n++L kk
  XP_022728796.1 140 ERQLAANEIEQNGSWTLEHAKLKARMEVLQRNQRHYMGEDLEKLSLRELQNLEQQLDSALKHVRSKKNQLMFESISELQKKDKALQEQNNMLAKK 234
                     5666677889999********************************************************************************** PP

           K-box  98 lee 100
                     ++e
  XP_022728796.1 235 VKE 237
                     986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 308 aa     Download sequence    
MLICVCFQEL IRNLSFFFFS DERYPEKVSK RERESNPFLF CLNPVSVSCF CDNRREGKKG  60
IISMGRGRVQ LKRIENKINR QVTFSKRRSG LLKKAHEISV LCDAEVALIV FSTRGHLFEY  120
STDSSMEMIL ERYERYSYTE RQLAANEIEQ NGSWTLEHAK LKARMEVLQR NQRHYMGEDL  180
EKLSLRELQN LEQQLDSALK HVRSKKNQLM FESISELQKK DKALQEQNNM LAKKVKEKEK  240
AVAQQRQLEE QNNCHDPSSM LLPQPMQSLN TSGNYEARSS GREEEGDPGQ DPVADALLPL  300
WMITTLNN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.19e-97MIKC_MADS family protein