PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728866.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 260aa MW: 29482.2 Da PI: 8.5733

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728866.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	46	1.2e-14	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W + Ed++l+d++k G g W I+++ g++R++k+c++rw++yl XP_022728866.1 14 RGAWNAIEDQILIDYIKANGEGKWGNIPKKAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.8	3.8e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +++E++l+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022728866.1 67 RGNISEQEEDLIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 260 aa Download sequence
MGRKPCCSKE GLNRGAWNAI EDQILIDYIK ANGEGKWGNI PKKAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SEQEEDLIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNS TLGKKVGGEQ 120 LKQSKDQNLK KAKTQSAAET PQFTAIKTKA SKCSKFLVTH QEPYKAENVD SIPVHDAKLS 180 DGTFSTTSEE THSVNSTLDF DIADLLALDI SDSEFWKSCQ NNNSIEEAES SGVARKTWFS 240 SDQHLQFSEE LLKDWIRYDM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	5e-61	MYB family protein