PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728904.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 298aa MW: 32932.6 Da PI: 7.5305

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728904.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.7	3.7e-15	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ +Ed l ++ +++G+g +W + +r+ g++R++k+c++rw++yl XP_022728904.1 14 RGPWSSDEDNTLRNYLEKYGTGgNWIALPRKAGLKRCGKSCRLRWLNYL 62 89*********************************************97 PP
2	Myb_DNA-binding	35.1	3e-11	68	111	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg +T+eEd ++ + G + W+ Ia+ ++ gRt++++k++w++ XP_022728904.1 68 RGGFTEEEDNIICFLYCSIGRR-WSVIAAQLP-GRTDNDVKNYWNT 111 788***************88.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 298 aa Download sequence
MGRAPCCDKA HVKRGPWSSD EDNTLRNYLE KYGTGGNWIA LPRKAGLKRC GKSCRLRWLN 60 YLRPDIKRGG FTEEEDNIIC FLYCSIGRRW SVIAAQLPGR TDNDVKNYWN TKLKKKLSAG 120 KIKGLDNNSN NKTITDSSTC NIISGQFSGS IPIKAEARAN GNSDCLNANG STTSSPYVTD 180 MEYQQNYDYP GLILDQLDQF LLPGLMEYST STANNNYSMS SSQEVSSLSS SSSFLLENNY 240 AAWSSNIGGA EDKGTVLDID FEGPRYIFNG SCFQDRSSEV APCFGFFSST TSLGNSTY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57620.1	5e-66	MYB family protein