PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728980.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 507aa MW: 55729.9 Da PI: 9.9227

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728980.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.6	1.9e-17	206	255	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+++P++ ++K +Ka+ L ++veYI+ Lq XP_022728980.1 206 RSKHSATEQRRRSKINDRFQMLRDVIPHS----DQKRDKASFLLEVVEYIQFLQ 255 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MTFCHCTVIQ ASNKIQAHLL KAGILKLMIS YNWNDWGRQV PRRKHQSRVP KTEGAVFTAA 60 EGSSTERNDE NSNCSSYNGS GFTLWEESAG KKGNTGKQNA GATPVVKEAA GQWATSSLER 120 ASQSSTNNHR NSFSSLSSSQ PSSKQKSQSF MEMIKSAKDS SHDDDFEEAE NFVLKKESSA 180 TTYSKGELGV KVDGKSTPDQ KANTPRSKHS ATEQRRRSKI NDRFQMLRDV IPHSDQKRDK 240 ASFLLEVVEY IQFLQEKVHK YEGTYQGWSH KPSKLMPWRN NNMPTENYAD QSRAKNGLSA 300 PAVVFSAKLE DKNITVTPTI PGISAKNPIE SDMSTATTFR AIDLYPGMMN KTTPFPVSLQ 360 PNFFTSAQST GLATQLQPRL PSDAENSSSQ PQSVLCHAGS CTTNGAVPSE KPKEQELTVE 420 GGNFSISSIY SRGLLNTLTQ ALQTSGVDLS RATISVQIEL GKQSSNSPTA STSTLKDREA 480 PSTNQRTTRR RVGRGEDSDH PLKKLKT

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MTFCHCTVIQ ASNKIQAHLL KAGILKLMIS YNWNDWGRQV PRRKHQSRVP KTEGAVFTAA  60
EGSSTERNDE NSNCSSYNGS GFTLWEESAG KKGNTGKQNA GATPVVKEAA GQWATSSLER  120
ASQSSTNNHR NSFSSLSSSQ PSSKQKSQSF MEMIKSAKDS SHDDDFEEAE NFVLKKESSA  180
TTYSKGELGV KVDGKSTPDQ KANTPRSKHS ATEQRRRSKI NDRFQMLRDV IPHSDQKRDK  240
ASFLLEVVEY IQFLQEKVHK YEGTYQGWSH KPSKLMPWRN NNMPTENYAD QSRAKNGLSA  300
PAVVFSAKLE DKNITVTPTI PGISAKNPIE SDMSTATTFR AIDLYPGMMN KTTPFPVSLQ  360
PNFFTSAQST GLATQLQPRL PSDAENSSSQ PQSVLCHAGS CTTNGAVPSE KPKEQELTVE  420
GGNFSISSIY SRGLLNTLTQ ALQTSGVDLS RATISVQIEL GKQSSNSPTA STSTLKDREA  480
PSTNQRTTRR RVGRGEDSDH PLKKLKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.6	4e-94	bHLH family protein