PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022728988.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

bHLH

Protein Properties

Length: 506aa MW: 55721 Da PI: 9.9308

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022728988.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	54.6	1.9e-17	205	254	2	55
HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS HLH 2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 r +h++ E+rRR++iN++f+ Lr+++P++ ++K +Ka+ L ++veYI+ Lq XP_022728988.1 205 RSKHSATEQRRRSKINDRFQMLRDVIPHS----DQKRDKASFLLEVVEYIQFLQ 254 889***********************9....9*****************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 506 aa Download sequence
MSPSELLWIA AYMKKSYVFL AGILKLMISY NWNDWGRQVP RRKHQSRVPK TEGAVFTAAE 60 GSSTERNDEN SNCSSYNGSG FTLWEESAGK KGNTGKQNAG ATPVVKEAAG QWATSSLERA 120 SQSSTNNHRN SFSSLSSSQP SSKQKSQSFM EMIKSAKDSS HDDDFEEAEN FVLKKESSAT 180 TYSKGELGVK VDGKSTPDQK ANTPRSKHSA TEQRRRSKIN DRFQMLRDVI PHSDQKRDKA 240 SFLLEVVEYI QFLQEKVHKY EGTYQGWSHK PSKLMPWRNN NMPTENYADQ SRAKNGLSAP 300 AVVFSAKLED KNITVTPTIP GISAKNPIES DMSTATTFRA IDLYPGMMNK TTPFPVSLQP 360 NFFTSAQSTG LATQLQPRLP SDAENSSSQP QSVLCHAGSC TTNGAVPSEK PKEQELTVEG 420 GNFSISSIYS RGLLNTLTQA LQTSGVDLSR ATISVQIELG KQSSNSPTAS TSTLKDREAP 480 STNQRTTRRR VGRGEDSDHP LKKLKT

Sequence ? help Back to Top

Protein Sequence Length: 506 aa Download sequence

MSPSELLWIA AYMKKSYVFL AGILKLMISY NWNDWGRQVP RRKHQSRVPK TEGAVFTAAE  60
GSSTERNDEN SNCSSYNGSG FTLWEESAGK KGNTGKQNAG ATPVVKEAAG QWATSSLERA  120
SQSSTNNHRN SFSSLSSSQP SSKQKSQSFM EMIKSAKDSS HDDDFEEAEN FVLKKESSAT  180
TYSKGELGVK VDGKSTPDQK ANTPRSKHSA TEQRRRSKIN DRFQMLRDVI PHSDQKRDKA  240
SFLLEVVEYI QFLQEKVHKY EGTYQGWSHK PSKLMPWRNN NMPTENYADQ SRAKNGLSAP  300
AVVFSAKLED KNITVTPTIP GISAKNPIES DMSTATTFRA IDLYPGMMNK TTPFPVSLQP  360
NFFTSAQSTG LATQLQPRLP SDAENSSSQP QSVLCHAGSC TTNGAVPSEK PKEQELTVEG  420
GNFSISSIYS RGLLNTLTQA LQTSGVDLSR ATISVQIELG KQSSNSPTAS TSTLKDREAP  480
STNQRTTRRR VGRGEDSDHP LKKLKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G08130.3	2e-93	bHLH family protein