PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729001.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 264aa    MW: 29057.1 Da    PI: 10.1047
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729001.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.54e-32117173158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  k+rkpylheSRh+hA+rR+RgsgGrF
  XP_022729001.1 117 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VKARKPYLHESRHQHAIRRARGSGGRF 173
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    
MKTMMLIKKA KLLLPLVQIY DGVLMVFFLC SLSVGNGGQE HHNLQHFTST MPAMRDECLT  60
QQPLLELVGH SIACASNPYQ DPFYGGMMAA YGHQPLGYPP FVGMPHARMA LPIEMAQEPV  120
YVNAKQYQGI LRRRQARAKA ELEKKVVKAR KPYLHESRHQ HAIRRARGSG GRFAKKTDAD  180
TSKHMAEEKG TGSGPALSSQ SASSSGSEQL PADSAETWNS LLTQQEARGT RLHDTHHVNG  240
SGPYQKRGGS ISSNQTSHRP LATQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.12e-54NF-YA family protein