PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729003.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family NF-YA
Protein Properties Length: 256aa    MW: 28135.4 Da    PI: 10.2344
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729003.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA102.53.8e-32109165158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     +ep+YVNaKQyq+Il+RRq+Rak+e ekk+  k+rkpylheSRh+hA+rR+RgsgGrF
  XP_022729003.1 109 QEPVYVNAKQYQGILRRRQARAKAELEKKV-VKARKPYLHESRHQHAIRRARGSGGRF 165
                     69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MKTMMLIKKA KLLLPLVQLE MVDKNITICS ILHLPCLLCV TNASHSNLCL SLLAIQFFLP  60
IPLQACASNP YQDPFYGGMM AAYGHQPLGY PPFVGMPHAR MALPIEMAQE PVYVNAKQYQ  120
GILRRRQARA KAELEKKVVK ARKPYLHESR HQHAIRRARG SGGRFAKKTD ADTSKHMAEE  180
KGTGSGPALS SQSASSSGSE QLPADSAETW NSLLTQQEAR GTRLHDTHHV NGSGPYQKRG  240
GSISSNQTSH RPLATQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G20910.19e-52NF-YA family protein