PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729028.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 380aa MW: 43104.8 Da PI: 8.3953

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729028.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.5	6.5e-25	78	121	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022729028.1 78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 121 79***************************************998 PP
2	QLQ	58.4	2.1e-20	10	44	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+Pp+Ll+ i+ XP_022729028.1 10 PFTASQWQELEHQALIFKYMVSGIPIPPDLLFTIK 44 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MMMSGRNRFP FTASQWQELE HQALIFKYMV SGIPIPPDLL FTIKRSCLDS SLSSRLFSRQ 60 PPHIGWNCFQ MGLGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGKNRSRKPV 120 EVTTTAIANP STATSNISSI TKTHPPSFSS LSSMSLSSSE SQQHHHQLRY PAYHSQVNHP 180 SMYPHASRTP GIGLSPQENA THSLLESGSY SQTNTDYRNS YVYGLKEEVD EHAFFSEPSG 240 TMRSFSDSSV DNSWQLTPLT MSSSSSKQRS CSGLQSEYSY LQLQSLTDHN SKQNKQDDEH 300 CYVLGSDIKC EMPIKFDKGE PQKTVHRFFD EWPPKHRDSW LDLDDKSSNS SSVSTTKLSI 360 SIPSTSHDFP IFNSRAHNDG

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MMMSGRNRFP FTASQWQELE HQALIFKYMV SGIPIPPDLL FTIKRSCLDS SLSSRLFSRQ  60
PPHIGWNCFQ MGLGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGKNRSRKPV  120
EVTTTAIANP STATSNISSI TKTHPPSFSS LSSMSLSSSE SQQHHHQLRY PAYHSQVNHP  180
SMYPHASRTP GIGLSPQENA THSLLESGSY SQTNTDYRNS YVYGLKEEVD EHAFFSEPSG  240
TMRSFSDSSV DNSWQLTPLT MSSSSSKQRS CSGLQSEYSY LQLQSLTDHN SKQNKQDDEH  300
CYVLGSDIKC EMPIKFDKGE PQKTVHRFFD EWPPKHRDSW LDLDDKSSNS SSVSTTKLSI  360
SIPSTSHDFP IFNSRAHNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	2e-50	GRF family protein