PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729029.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

GRF

Protein Properties

Length: 378aa MW: 42834.5 Da PI: 8.2341

Description

GRF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729029.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRC	78.5	6.4e-25	78	121	1	44
WRC 1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkske 44 d+epgrCrRtDGKkWRCs+++++++k+CErH+hrg++rsrk++e XP_022729029.1 78 DPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVE 121 79***************************************998 PP
2	QLQ	58.4	2.1e-20	10	44	2	36
QLQ 2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36 +FTa+Q+q+L++Q+l++Ky++++ P+Pp+Ll+ i+ XP_022729029.1 10 PFTASQWQELEHQALIFKYMVSGIPIPPDLLFTIK 44 8******************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 378 aa Download sequence
MMMSGRNRFP FTASQWQELE HQALIFKYMV SGIPIPPDLL FTIKRSCLDS SLSSRLFSRQ 60 PPHIGWNCFQ MGLGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGKNRSRKPV 120 EVTTTAIANP STATSNISSI TKTHPPSFSS LSSMSLSSSE SQQHHHQLRY PAYHSQVNHP 180 SMYPHASRTP GIGLSPQENA THSLLESGSY SQTNTDYSYV YGLKEEVDEH AFFSEPSGTM 240 RSFSDSSVDN SWQLTPLTMS SSSSKQRSCS GLQSEYSYLQ LQSLTDHNSK QNKQDDEHCY 300 VLGSDIKCEM PIKFDKGEPQ KTVHRFFDEW PPKHRDSWLD LDDKSSNSSS VSTTKLSISI 360 PSTSHDFPIF NSRAHNDG

Sequence ? help Back to Top

Protein Sequence Length: 378 aa Download sequence

MMMSGRNRFP FTASQWQELE HQALIFKYMV SGIPIPPDLL FTIKRSCLDS SLSSRLFSRQ  60
PPHIGWNCFQ MGLGRKVDPE PGRCRRTDGK KWRCSKEAYP DSKYCERHMH RGKNRSRKPV  120
EVTTTAIANP STATSNISSI TKTHPPSFSS LSSMSLSSSE SQQHHHQLRY PAYHSQVNHP  180
SMYPHASRTP GIGLSPQENA THSLLESGSY SQTNTDYSYV YGLKEEVDEH AFFSEPSGTM  240
RSFSDSSVDN SWQLTPLTMS SSSSKQRSCS GLQSEYSYLQ LQSLTDHNSK QNKQDDEHCY  300
VLGSDIKCEM PIKFDKGEPQ KTVHRFFDEW PPKHRDSWLD LDDKSSNSSS VSTTKLSISI  360
PSTSHDFPIF NSRAHNDG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13960.1	3e-50	GRF family protein