PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729260.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 347aa    MW: 37942 Da    PI: 4.4707
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729260.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA50.72.4e-16207243135
            GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C++Cg+++  Tp +Rrgp g++tLCnaCGl+++ kg+
  XP_022729260.1 207 CQHCGVSEkyTPAMRRGPAGPRTLCNACGLMWANKGT 243
                     **********************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MAAVNPQPLQ ARPFEEYAGG TIQIEDDDGD YEDDAMDDVE DRNVKFLNVA EHGIGVLGGA  60
AGGGVFMASR TSELSLSFEG EVYVFPAVTP EKVQAVLLLL GGRDIPTGVP TVEVTFDQKN  120
RGVGDVPKRS NLSRRIESLV RFREKRKERC FDKKIRYTVR KEVAQRMNRK NGQFASLKES  180
TSTSNWDSSQ TGLQDSTRCA ETVVRRCQHC GVSEKYTPAM RRGPAGPRTL CNACGLMWAN  240
KGTLRDLSKG GRNIFLDQTE PETPNDVKPS IMEGDFSGNG DEHDVADGSN NASVNPDVED  300
LHGSSEDLTN SLPMGIVHPS ADDDEQEPLV ELANPSDTEI DIPSSFD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.27e-72GATA family protein