PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729289.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

Trihelix

Protein Properties

Length: 456aa MW: 51693 Da PI: 6.169

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729289.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	63.9	3.6e-20	152	219	25	85
trihelix 25 k......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr.tsessstcpyfdql 85 k +kk++W+ vsk m ++g+++sp+qC++k+++lnkrykk++++ +++ +++++++ ++ d++ XP_022729289.1 152 KrksgipQKKGKWKTVSKIMISKGYHVSPQQCEDKFNDLNKRYKKLNDILGRGtSCRVVENPSLMDSM 219 03334559*********************************************669999999999888 PP

Sequence ? help Back to Top
Protein Sequence Length: 456 aa Download sequence
MDNSGLGGGF LSGPNEGLFN IESSVHRQQQ PHLSQPSLMP HNHMAMMSGL ENEHRSIGLM 60 EAKGSNSKGV SVNFGKGKGV SPIIALTNGS MSEEDEPSYN EDGNGENSNG GRGKKGSPWQ 120 RMKWTDNVVR LLKAVVACVG DDGMIEGVEG LKRKSGIPQK KGKWKTVSKI MISKGYHVSP 180 QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV ENPSLMDSMP HLSAKAKDDV KKILGSKHLF 240 YQEMCAYHNR QKIPNCQDLD LRGCSIPLER CLKDNKGSDE EEAEGIGDSE DDDEMANEDD 300 NNAVYEEERI GEFNERKKAS AEEGHFWSQS AGQDCFKMEM AGIFQDPTRS SLERKEWIKR 360 QMLQLQEERV NLQTEAFELE KQCFKWLRYC NKKDRELERL RLENERMRLE NEQSILQLRQ 420 KELEVGYRRS DASLDPTSLG IDRLQGKDQI DTGRHQ

Sequence ? help Back to Top

Protein Sequence Length: 456 aa Download sequence

MDNSGLGGGF LSGPNEGLFN IESSVHRQQQ PHLSQPSLMP HNHMAMMSGL ENEHRSIGLM  60
EAKGSNSKGV SVNFGKGKGV SPIIALTNGS MSEEDEPSYN EDGNGENSNG GRGKKGSPWQ  120
RMKWTDNVVR LLKAVVACVG DDGMIEGVEG LKRKSGIPQK KGKWKTVSKI MISKGYHVSP  180
QQCEDKFNDL NKRYKKLNDI LGRGTSCRVV ENPSLMDSMP HLSAKAKDDV KKILGSKHLF  240
YQEMCAYHNR QKIPNCQDLD LRGCSIPLER CLKDNKGSDE EEAEGIGDSE DDDEMANEDD  300
NNAVYEEERI GEFNERKKAS AEEGHFWSQS AGQDCFKMEM AGIFQDPTRS SLERKEWIKR  360
QMLQLQEERV NLQTEAFELE KQCFKWLRYC NKKDRELERL RLENERMRLE NEQSILQLRQ  420
KELEVGYRRS DASLDPTSLG IDRLQGKDQI DTGRHQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G21200.1	5e-70	Trihelix family protein