PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729718.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 308aa MW: 34870.3 Da PI: 8.8886

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729718.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.6	4.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ Ed++l+d++k +G g+W+ +++ g++R++k+c++rw++yl XP_022729718.1 14 RGAWSVLEDKILIDYIKAHGEGRWRNLPKRAGLNRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	53.3	6.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ +t+E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022729718.1 67 RGNISTDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 308 aa Download sequence
MGRSPCCSKE GLNRGAWSVL EDKILIDYIK AHGEGRWRNL PKRAGLNRCG KSCRLRWLNY 60 LRPDIKRGNI STDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLGKKVQDHQ 120 NSAAAAALKH KKSNGRTMKK SEAAQLVPTD GSSSSHVVLT KATRCSKVFV KPRYPPKVDP 180 NFDRNREAKP SKNGDGHCPM TQTWASTSIN CLLPISENEK TNNNSSDFML DFDNVGEFCL 240 PDLLNSDFSD IGNLNYNNAS VPSQDQPLIF SEEMRQDWTS THYALNLASD LQYSLAPFIE 300 NFEDWLVK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G35550.1	1e-63	MYB family protein