PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729719.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB

Protein Properties

Length: 285aa MW: 32394.6 Da PI: 7.7972

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729719.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	50.3	5.5e-16	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+W++ Ed++l++++k +G g W+ +++ g+ R++k+c++rw++yl XP_022729719.1 14 RGAWSAREDKILINYIKIHGEGKWRDLPQRAGLQRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	54.2	3.4e-17	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ ++eE+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_022729719.1 67 RGNISAEEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTN 111 7899****************.*****.*********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 285 aa Download sequence
MGRRPCCAKE GLNRGAWSAR EDKILINYIK IHGEGKWRDL PQRAGLQRCG KSCRLRWLNY 60 LRPDIKRGNI SAEEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT NLSKRVQGQK 120 ITPKTTQPSN MLLNKLGKRG CVKSSPEITT DDQHKVIRTK AVKCTKAVNV IPRLLDNQTA 180 ETHSSSVHED NSVDFLLDFD INELLVLDAP ITDFHDPIQQ VDEHCNNAAE NGEYGDGFNL 240 NLDQVDLYRS PDESAARPDT SRASSDLFQT TETLDLRSLA FYLLD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	4e-63	MYB family protein