PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729738.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 839aa    MW: 92202.7 Da    PI: 6.2978
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729738.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox57.22.8e-182078357
                    --SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  3 kRttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                    k  ++t+eq+e+Le+l++++++ps  +r++  +++    +++ +q+kvWFqNrR +ek+
  XP_022729738.1 20 KYVRYTPEQVEALERLYHECPKPSSMRRQQVIRECpilsNIEPKQIKVWFQNRRCREKQ 78
                    5679*****************************************************97 PP
2START185.82.3e-581643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +++ s++++g a+ra+g+v  +++  v+e+l+d++ W ++++++++++v+s+g  g+++l 
  XP_022729738.1 164 IAEETLTEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCTGVAARACGLVGLDPT-RVAEILKDRPSWFRYCRSVDVVNVLSTGngGTIELL 257
                     789*******************************************************.8888888888************************** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     +++l+a+++l+p Rdf+ +Ry+  l++g++v++++S++++q+ p+    +++vRaellpSg+li+p+++g+s +++v+h+dl+ ++++++lr+l+
  XP_022729738.1 258 YMQLYAPTTLAPaRDFWLLRYTSVLEDGSLVVCERSLNNTQNGPSmppAANFVRAELLPSGYLIRPCEGGGSIIHVVDHMDLEPWSVPEVLRPLY 352
                     *******************************************99999*********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s++  ++kt++a+l+++++
  XP_022729738.1 353 ESSTLLAQKTTMAALRHLRQ 372
                     ***************99876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 839 aa     Download sequence    
MMAVTSSCKE GNKIAMDNGK YVRYTPEQVE ALERLYHECP KPSSMRRQQV IRECPILSNI  60
EPKQIKVWFQ NRRCREKQRK EASRLQAVNR KLTAMNKLLM EENDRLQKQV SQLVYENSYF  120
RRQTQNATLA TTDTSCESVV TSGQHHLTPQ HPPRDASPAG LLSIAEETLT EFLSKATGTA  180
VEWVQMPGMK PGPDSIGIVA ISHGCTGVAA RACGLVGLDP TRVAEILKDR PSWFRYCRSV  240
DVVNVLSTGN GGTIELLYMQ LYAPTTLAPA RDFWLLRYTS VLEDGSLVVC ERSLNNTQNG  300
PSMPPAANFV RAELLPSGYL IRPCEGGGSI IHVVDHMDLE PWSVPEVLRP LYESSTLLAQ  360
KTTMAALRHL RQISQEISQP NVTGWGRRPA ALRALSQKLS KGFNEAVNGF TDDGWSMLES  420
DGVDDVTLLV NSSPGKMMGI NLSYSNGFPS MGSAVLCAKA SMLLQNVPPA ILLRFLREHR  480
SEWADSGIDA YSAAAVKAGP CSLPVARGGS FGGQLILPLA HTIEHEEFME VIKLESMGHY  540
REDMIMPGDI FLLQLCSGVD ENAVGTCAEL IFAPIDASFS DDAPIIPSGF RIIPLDSGMD  600
ASGPNRTLDL ASTLEVGASG NRATGDNSGR CGSAKSVMTI AFQFVYEIHL QENVATMARQ  660
YVRSIIASVQ RVALALSPSH FGSHAGFPTA PGTPEAQTLA RWICQSYRCY LGVELLKHEG  720
SESILKMLWH HTDAILCCSM KALPVFTFAN QAGLDMLETT LVALQDISLE KIFDENGRKA  780
LFAELPEVMQ QGFMCLQSGI CLSSMGRPVS YERAVAWKVV NEEENAHCIC FMFINWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32880.10.0HD-ZIP family protein