PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729749.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

WRKY

Protein Properties

Length: 594aa MW: 64881.6 Da PI: 6.7214

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729749.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	105.6	2.6e-33	250	307	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 dDgynWrKYGqK+vkgse+prsYY+Ct+++Cp+kkkvers d++++ei+Y+g+Hnh+k XP_022729749.1 250 DDGYNWRKYGQKQVKGSENPRSYYKCTYPNCPTKKKVERSL-DGQITEIVYKGSHNHPK 307 8**************************************.*************85 PP
2	WRKY	105.8	2.2e-33	421	479	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+Ct++gCpv+k+ver+++d ++v++tYeg+Hnh+ XP_022729749.1 421 LDDGYRWRKYGQKVVKGNPNPRSYYKCTHPGCPVRKHVERASHDHRAVITTYEGKHNHD 479 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MAASSCSNLD NSYVQNAFSF SSHPFMTTSF SDLLASGVTD DENPSSTFNG GLDTKRGGGL 60 SLSDRIAERT GSGVPKFKSL PPPSLPISPP PVSPSSYFAI PPGLSPAELL DSPVLLNASN 120 VLPSPTTGTF PAQAFDWKSN SGNNQQNVKQ EDNNYSDFSF QTQPRSATSL SSLFLSSTNT 180 IQTAQQGWSL QDSAKQDDFS SAKSMVKPEY TQMQSFSPEI ANIQSNSGFQ SDYSNYHQQP 240 QSIRESKRSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERSL DGQITEIVYK 300 GSHNHPKPQS TRRSSSSSSS IAIQTSSVAS SEIPDHSFPT HGSGQMDSVA TPENSSISVG 360 DDDFDQGSQK SKSGGDEIDE DEPEAKRWRS EGENEGISAP GSRTVREPRV VVQTTSDIDI 420 LDDGYRWRKY GQKVVKGNPN PRSYYKCTHP GCPVRKHVER ASHDHRAVIT TYEGKHNHDV 480 PAARGSGSHS VHRTLPDNNN NNGNNNVAMA IRPSAVNNHY NSMANPLRSS SSSTASEGQS 540 PFTLEMLQGT GNFGFSGYGN SMGSFMNQPQ HVNNMFSRTK EEPRDEAFIE SLLC

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MAASSCSNLD NSYVQNAFSF SSHPFMTTSF SDLLASGVTD DENPSSTFNG GLDTKRGGGL  60
SLSDRIAERT GSGVPKFKSL PPPSLPISPP PVSPSSYFAI PPGLSPAELL DSPVLLNASN  120
VLPSPTTGTF PAQAFDWKSN SGNNQQNVKQ EDNNYSDFSF QTQPRSATSL SSLFLSSTNT  180
IQTAQQGWSL QDSAKQDDFS SAKSMVKPEY TQMQSFSPEI ANIQSNSGFQ SDYSNYHQQP  240
QSIRESKRSD DGYNWRKYGQ KQVKGSENPR SYYKCTYPNC PTKKKVERSL DGQITEIVYK  300
GSHNHPKPQS TRRSSSSSSS IAIQTSSVAS SEIPDHSFPT HGSGQMDSVA TPENSSISVG  360
DDDFDQGSQK SKSGGDEIDE DEPEAKRWRS EGENEGISAP GSRTVREPRV VVQTTSDIDI  420
LDDGYRWRKY GQKVVKGNPN PRSYYKCTHP GCPVRKHVER ASHDHRAVIT TYEGKHNHDV  480
PAARGSGSHS VHRTLPDNNN NNGNNNVAMA IRPSAVNNHY NSMANPLRSS SSSTASEGQS  540
PFTLEMLQGT GNFGFSGYGN SMGSFMNQPQ HVNNMFSRTK EEPRDEAFIE SLLC

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G38470.1	1e-112	WRKY family protein