PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729815.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 843aa    MW: 92290 Da    PI: 6.0535
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.9e-182683457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022729815.1 26 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsHIEPKQIKVWFQNRRCREKQ 83
                    5789****************************************************97 PP
2START156.71.8e-491643722205
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W ++++  e+      g  g+++l 
  XP_022729815.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRNLEVFTMFPAGngGTIELV 257
                     7899******************************************************.7777777777*******9999999998888****** PP

                     EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHH CS
           START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslv 185
                     ++++ a+++l+p Rdf+++Ry+ +l+ g++v++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lrsl+
  XP_022729815.1 258 YTQTFAPTTLAPaRDFWTLRYTTTLENGSLVVCERSLSGSGAGPSaaaAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRSLY 352
                     **************************************99999988999********************************************** PP

                     HHHHHHHHHHHHHHTXXXXX CS
           START 186 ksglaegaktwvatlqrqce 205
                     +s+ + ++k++ a+l++ ++
  XP_022729815.1 353 ESSKVIAQKMTIAALRYVRQ 372
                     ***************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 843 aa     Download sequence    
MAMALAQHRD SSSGSSINKH LDAGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSHIEPKQI KVWFQNRRCR EKQRKESSRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLH TVNASATDAS CDSVVTTPQH SLRDANNPAG LLSIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRNL  240
EVFTMFPAGN GGTIELVYTQ TFAPTTLAPA RDFWTLRYTT TLENGSLVVC ERSLSGSGAG  300
PSAAAAAQFV RAEVLPSGYL IRPCEGGGSI IHIVDHLNLE AWSVPEVLRS LYESSKVIAQ  360
KMTIAALRYV RQIAQETSGE VVYSLGRQPA VLRTFSQRLS RGFNDAINGF NDDGWSIMNC  420
DGTEDVIIAV NSSKRLSSTS NPANALSFLG GVLCAKASML LQNVPPAVLV RFLREHRSEW  480
ADFNVDAYSA ASLKAGTYAY PGMRPTRFTG SQIIMPLGHT IENEELLEVI RLEGHSLVQE  540
DAFLSRDVHL LQICCGIDEN AVGACSELVF APIDEMFPDD APLLPSGFRI IPLESKPSDT  600
QDSLTTNRTL DLTSSLEVGP ATNHSAGDAL SCQNTRSVLT IAFQFPFDSN LQDNVANMAR  660
QYVRSVISSF QRVAMAISPS GLSPAVGPKL SPGSPEALTL AHWICQSYSY HLGAELLRSE  720
SLGGDSILKN LWHHQDAILC CSVKSLPVFI FANQAGLDML ETTLVALQDI TLDKIFDESG  780
RKGLCSDFAK LMQEGFAYLP AGICMSTMGR HASYEQAVAW KVLEADESTV HCLAFSFVNW  840
SFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein