PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022729816.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family HD-ZIP
Protein Properties Length: 815aa    MW: 89164.5 Da    PI: 6.0517
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022729816.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox56.83.7e-182683457
                    -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
        Homeobox  4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57
                      ++t+eq+e+Le++++++++ps  +r++L +++    +++ +q+kvWFqNrR +ek+
  XP_022729816.1 26 YVRYTAEQVEALERVYAECPKPSSLRRQQLIRECpilsHIEPKQIKVWFQNRRCREKQ 83
                    5789****************************************************97 PP
2START45.52e-15164259296
                     HHHHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
           START   2 laeeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                     +aee+++e+++ka+ ++  Wv+++ +++g++++ +f+ s+++sg a+ra+g+v  +++   +e+l+d++ W ++++  e+      g  g+++l 
  XP_022729816.1 164 IAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPT-KIAEILKDRPSWFRDCRNLEVFTMFPAGngGTIELV 257
                     7899******************************************************.7777777777*******9999888877777777766 PP

                     EE CS
           START  95 va 96 
                     ++
  XP_022729816.1 258 YT 259
                     55 PP
3START57.93.4e-19261344125205
                     EEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE--SSXXHHHHHHHHHHHHHHHHHHHHHHTXXXXX CS
           START 125 ivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlkgrlphwllrslvksglaegaktwvatlqrqce 205
                     ++++S++     p+    +++vRae+lpSg+li+p+++g+s +++v+h +l++++++++lrsl++s+ + ++k++ a+l++ ++
  XP_022729816.1 261 VCERSLSGSGAGPSaaaAAQFVRAEVLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRSLYESSKVIAQKMTIAALRYVRQ 344
                     67777777666666677899***********************************************************98765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 815 aa     Download sequence    
MAMALAQHRD SSSGSSINKH LDAGKYVRYT AEQVEALERV YAECPKPSSL RRQQLIRECP  60
ILSHIEPKQI KVWFQNRRCR EKQRKESSRL QTVNRKLTAM NKLLMEENDR LQKQVSQLVC  120
ENGYMRQQLH TVNASATDAS CDSVVTTPQH SLRDANNPAG LLSIAEETLA EFLSKATGTA  180
VDWVQMPGMK PGPDSVGIFA ISQSCSGVAA RACGLVSLEP TKIAEILKDR PSWFRDCRNL  240
EVFTMFPAGN GGTIELVYTQ VCERSLSGSG AGPSAAAAAQ FVRAEVLPSG YLIRPCEGGG  300
SIIHIVDHLN LEAWSVPEVL RSLYESSKVI AQKMTIAALR YVRQIAQETS GEVVYSLGRQ  360
PAVLRTFSQR LSRGFNDAIN GFNDDGWSIM NCDGTEDVII AVNSSKRLSS TSNPANALSF  420
LGGVLCAKAS MLLQNVPPAV LVRFLREHRS EWADFNVDAY SAASLKAGTY AYPGMRPTRF  480
TGSQIIMPLG HTIENEELLE VIRLEGHSLV QEDAFLSRDV HLLQICCGID ENAVGACSEL  540
VFAPIDEMFP DDAPLLPSGF RIIPLESKPS DTQDSLTTNR TLDLTSSLEV GPATNHSAGD  600
ALSCQNTRSV LTIAFQFPFD SNLQDNVANM ARQYVRSVIS SFQRVAMAIS PSGLSPAVGP  660
KLSPGSPEAL TLAHWICQSY SYHLGAELLR SESLGGDSIL KNLWHHQDAI LCCSVKSLPV  720
FIFANQAGLD MLETTLVALQ DITLDKIFDE SGRKGLCSDF AKLMQEGFAY LPAGICMSTM  780
GRHASYEQAV AWKVLEADES TVHCLAFSFV NWSFV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60690.10.0HD-ZIP family protein