PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729951.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

E2F/DP

Protein Properties

Length: 466aa MW: 51795.8 Da PI: 4.4577

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729951.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	87	1.4e-27	144	209	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 r+++sL+llt+kf++l++++e+gi++ln++a++L +v ++RRiYDi+NVLe+++liekk kn+i+wkg XP_022729951.1 144 RYDSSLGLLTKKFINLIKQAEDGILDLNKAADTL---EV--QKRRIYDITNVLEGIGLIEKKLKNRIQWKG 209 6899****************************...99..**************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 466 aa Download sequence
MSGSQASEQL KQSIQQQQQN QHSLKRQLHF SMKPSFVAPG GDYHRFASTE PCCIADQEAE 60 AIVVKSPLKR KSDVVDREVE SGEWAMPQGY TEVVSSSLQT PVSGKGGKAQ KTSRLTKSSK 120 FGPQTPASNL GSPGNNLTPA GPCRYDSSLG LLTKKFINLI KQAEDGILDL NKAADTLEVQ 180 KRRIYDITNV LEGIGLIEKK LKNRIQWKGL DVSRPGEVDE NVATLQAEVE NLSIEERRLD 240 EQIREMQERL RVLSEDENNQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEE 300 AVDYPQRRYR IVLRSSMGPI DVYLVSQFEE KFEEIQGVDQ PPNFPSTSCL NENPATTMVT 360 EESRGKEIEM EGQDTNRMSS DLNASQDFVS GIMKIVPSDV DSDADYWLLS DPGVSITDMW 420 PTESGVEWNE FDTLREDCGM AAVSAPHPQT PPSNATEVPS ANSTGR

Sequence ? help Back to Top

Protein Sequence Length: 466 aa Download sequence

MSGSQASEQL KQSIQQQQQN QHSLKRQLHF SMKPSFVAPG GDYHRFASTE PCCIADQEAE  60
AIVVKSPLKR KSDVVDREVE SGEWAMPQGY TEVVSSSLQT PVSGKGGKAQ KTSRLTKSSK  120
FGPQTPASNL GSPGNNLTPA GPCRYDSSLG LLTKKFINLI KQAEDGILDL NKAADTLEVQ  180
KRRIYDITNV LEGIGLIEKK LKNRIQWKGL DVSRPGEVDE NVATLQAEVE NLSIEERRLD  240
EQIREMQERL RVLSEDENNQ KWLFVTEEDI KSLPCFQNET LIAIKAPHGT TLEVPDPDEE  300
AVDYPQRRYR IVLRSSMGPI DVYLVSQFEE KFEEIQGVDQ PPNFPSTSCL NENPATTMVT  360
EESRGKEIEM EGQDTNRMSS DLNASQDFVS GIMKIVPSDV DSDADYWLLS DPGVSITDMW  420
PTESGVEWNE FDTLREDCGM AAVSAPHPQT PPSNATEVPS ANSTGR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G22220.2	1e-177	E2F/DP family protein