PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022729999.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 235aa MW: 25729.8 Da PI: 5.538

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022729999.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	178.2	7.6e-56	48	152	1	102
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+++dfknh+lPlarikki+kadedv+misaeaP+l++kacelfilelt+rswlhaeenkrrtl+k+diaaa+trtdifdfl XP_022729999.1 48 QLQVFWTYQrqeIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFL 142 89***998899****************************************************************************** PP NF-YC 93 vdivprdelk 102 vd+vprde+k XP_022729999.1 143 VDTVPRDEIK 152 *****975 PP

Sequence ? help Back to Top
Protein Sequence Length: 235 aa Download sequence
MDSNQQAQSS SYPPQPPTSA ITHAPSSTTA MATPPFHHHH LLQQQQQQLQ VFWTYQRQEI 60 EQVNDFKNHQ LPLARIKKIM KADEDVRMIS AEAPILFAKA CELFILELTI RSWLHAEENK 120 RRTLQKNDIA AAITRTDIFD FLVDTVPRDE IKDEPSLGGM VGATASGVPY YYPPMGQPAG 180 PGGMMIGRPA VDPTGGVYVQ PPSQAWQSVW QTAGAEDGSY GSGASSGQGN LDGQG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	121	127	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	5e-89	NF-YC family protein