PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730018.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 661aa    MW: 75052.6 Da    PI: 6.6751
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730018.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS364.21.8e-1112856561374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l++lL++cAeav  +d+++a+ +L ++++++sp g++ qR a+yft+AL+arla+s+se y+al +s+ +    + ++ a kl+   +P++k+s+
  XP_022730018.1 285 LRTLLIQCAEAVGGNDFRNANDFLMQIKNHSSPFGNASQRKAHYFTKALEARLAGSGSEEYAALVSSRIP----TANIEACKLLLSSCPFMKVSN 375
                     6789************************************************************999997....789999*************** PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188
                     ++a ++I++ +++++r+Hii f++ +GlQW +L+q L++Rp++pp+lR+Tg++ p+ g  s+ ++eetg+ La+ ++++++pfe+n+ v+k++e+
  XP_022730018.1 376 FLATEMIMKLAKKATRIHIIHFGVPYGLQWKSLIQRLSTRPGNPPMLRVTGIDLPQVGleSAARVEETGHFLANCCQHFNIPFEYNA-VTKKWES 469
                     ********************************************************9999***************************.7****** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpres.eer 282
                     ++le+L++ ++E+++Vn+ ++l +llde+++l+s+rd+vL+lv++l+P+++++   + ++n++ F+ rf eal+y+s++fd+le+ +p+e  +er
  XP_022730018.1 470 IQLEDLKIGRNEVIVVNCLYRLRHLLDETADLSSPRDTVLNLVRKLNPDIFIHGIVNGSYNAPFFVSRFREALYYFSTMFDMLEEIVPSEYdQER 564
                     ****************************************************************************************99879** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E+ + ++ei nvvaceg+er+er et+++W+ r  +aG+ ++pl++++ k+ak+ ++  + + + v+e+++++++gWk+r L+++S+Wr
  XP_022730018.1 565 VALEENIYRKEILNVVACEGSERVERPETYKQWQVRHLRAGLLQLPLNQDMLKNAKAHVKLRYHKDFLVDEDKNWMLQGWKGRILFALSFWR 656
                     ***************************************************************888*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 661 aa     Download sequence    
MATPVMNPSS YSTVGDPAEQ SYFPNAVFFT PILTEDAVEK TSLLEDSTLR TAESSFIDIL  60
ADKYPLSTTL PCPSASAYNL VQSDFICDFA RGEFSCMLYP QVVENAPQDY PQPTLQSFSP  120
ESFFSEADAR VLFPVNKSLV PDFLAPDIFD KSLPNLQFIE GGVKESQKLI AYGDHMSSEE  180
ETRSVATERE NSDKMDYSFC KRREVDHQSR GKGEIGREHG RLVYPEHFEQ PEMFINDVSA  240
TLTADIGWQN EPAAKIMNIC GKPKEKGAGT KQRSRSVNKR KLVDLRTLLI QCAEAVGGND  300
FRNANDFLMQ IKNHSSPFGN ASQRKAHYFT KALEARLAGS GSEEYAALVS SRIPTANIEA  360
CKLLLSSCPF MKVSNFLATE MIMKLAKKAT RIHIIHFGVP YGLQWKSLIQ RLSTRPGNPP  420
MLRVTGIDLP QVGLESAARV EETGHFLANC CQHFNIPFEY NAVTKKWESI QLEDLKIGRN  480
EVIVVNCLYR LRHLLDETAD LSSPRDTVLN LVRKLNPDIF IHGIVNGSYN APFFVSRFRE  540
ALYYFSTMFD MLEEIVPSEY DQERVALEEN IYRKEILNVV ACEGSERVER PETYKQWQVR  600
HLRAGLLQLP LNQDMLKNAK AHVKLRYHKD FLVDEDKNWM LQGWKGRILF ALSFWRPAKK  660
P
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-149GRAS family protein