PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730031.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 208aa MW: 24156.7 Da PI: 10.5036

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730031.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.5	8.2e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqv+fskRrng+lKKA+ELS+LCdaeva++ifss+gk+y ++s XP_022730031.1 9 KRIENPTNRQVSFSKRRNGLLKKAFELSILCDAEVALLIFSSSGKVYQFAS 59 79***********************************************86 PP
2	K-box	68.4	2.4e-23	84	171	12	99
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 +++e ++ e++ Lk+ i++L ++hl Ged+ L +++L+qLe+qL+ ++++iRs+K++++ +q l+++ k+l+een++L+k+++ XP_022730031.1 84 RTMEFWRSEIEELKRSINTLDARLKHLSGEDILALGMRDLKQLERQLKIGVERIRSRKSRIVSDQATLLKRRHKQLKEENTQLQKRVK 171 56899*******************************************************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 208 aa Download sequence
MRRGKVELKR IENPTNRQVS FSKRRNGLLK KAFELSILCD AEVALLIFSS SGKVYQFASH 60 GMDKSIAKYK REVGLPDSNN PQFRTMEFWR SEIEELKRSI NTLDARLKHL SGEDILALGM 120 RDLKQLERQL KIGVERIRSR KSRIVSDQAT LLKRRHKQLK EENTQLQKRV KLDEAQESNI 180 SSRIVGENAC SMFQQRVLQD EDLVNEAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	2e-48	MIKC_MADS family protein