PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730039.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MIKC_MADS

Protein Properties

Length: 206aa MW: 23929.4 Da PI: 10.4405

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730039.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.6	8.1e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien +nrqv+fskRrng+lKKA+ELS+LCdaeva++ifss+gk+y ++s XP_022730039.1 9 KRIENPTNRQVSFSKRRNGLLKKAFELSILCDAEVALLIFSSSGKVYQFAS 59 79***********************************************86 PP
2	K-box	69.1	1.4e-23	84	172	12	100
K-box 12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100 +++e ++ e++ Lk+ i++L ++hl Ged+ L +++L+qLe+qL+ ++++iRs+K++++ +q l+++ k+l+een++L+k+l+e XP_022730039.1 84 RTMEFWRSEIEELKRSINTLDARLKHLSGEDILALGMRDLKQLERQLKIGVERIRSRKSRIVSDQATLLKRRHKQLKEENTQLQKRLDE 172 56899********************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 206 aa Download sequence
MRRGKVELKR IENPTNRQVS FSKRRNGLLK KAFELSILCD AEVALLIFSS SGKVYQFASH 60 GMDKSIAKYK REVGLPDSNN PQFRTMEFWR SEIEELKRSI NTLDARLKHL SGEDILALGM 120 RDLKQLERQL KIGVERIRSR KSRIVSDQAT LLKRRHKQLK EENTQLQKRL DEAQESNISS 180 RIVGENACSM FQQRVLQDED LVNEAE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45650.1	1e-48	MIKC_MADS family protein