PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730046.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family Trihelix
Protein Properties Length: 354aa    MW: 41738.1 Da    PI: 4.57
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730046.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix38.72.6e-12109193286
        trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                     Wt+qe+ +L+e+  ++  +l+r++l++ +W +v++k+  + +  ++  qC+  ++ l++++kk+k  ++k    +ss++++f+++e
  XP_022730046.1 109 WTQQEIYVLLEVWGNRFLQLGRRSLRGEDWVDVAEKVsDALKSGKNEGQCRRMIDGLKRKFKKEKPKAEKM-GLNSSKWVFFRKME 193
                     *************************************77889999***********************996.89999********8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    
MDDIEDDSRY PTKPYSFSFN RHPQYPRSIR TRHVYSYGPE EVVDEEEEME EENDNVEGDN  60
NDDPDVYYHR INESERFERY PKRQKLRTSV PCYQITPDRR ASFKSTYDWT QQEIYVLLEV  120
WGNRFLQLGR RSLRGEDWVD VAEKVSDALK SGKNEGQCRR MIDGLKRKFK KEKPKAEKMG  180
LNSSKWVFFR KMEMLMGLGS SSFRQKESGL ACGVDSGEFV FMNPQVYLDR SNGFDEMRDS  240
PTESEMEEDD EEVEVGGSRM GGEGNDLHSM RMLADSVQRF GKIYEKIESS KREHTKELEK  300
MRMDFQKELE EQKKQILERA QAEIAKMKEE DYADKGERDD DDENDDNSTE NISQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24490.12e-83Trihelix family protein