PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730215.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 543aa    MW: 59582.5 Da    PI: 5.1017
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730215.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS418.94.5e-1281605241373
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdg..dpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkf 93 
                     lv+ L++cA++v+ gdl+la++l+  ++ l +       + ++a +f  AL+ r+++   ++       + +  ++ e+   ++ f+e++P+lkf
  XP_022730215.1 160 LVHMLMTCADCVQRGDLSLATSLIDDMKGLLTRVNtvCGIGKVAGHFIDALSGRIYQ---GIG----GGSVNGGSVLENEILYHHFYEACPYLKF 247
                     689*************************99555441269*****************9...333....23333334778888999*********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrled 188
                     +h+taNqaIlea+eg+++vH++Df++++GlQWpaL+qaLa Rp+gpp lR+Tg+g+p+++ +++l+e+g rLa++A++++++f f+ ++a+rled
  XP_022730215.1 248 AHFTANQAILEAFEGHDCVHVVDFNLMHGLQWPALIQALALRPDGPPLLRLTGIGPPSPDGRDSLREIGLRLAELARSVNIRFFFRGVAASRLED 342
                     *********************************************************************************************** PP

            GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283
                     +++++Lrv+p+Ea+aVn+++qlhrll ++ + + ++++vL+ ++sl+Pk+++vveqea+hn++ Fl+rf+eal+yys++fdslea    + + ++
  XP_022730215.1 343 VKPWMLRVNPKEAVAVNSIMQLHRLLGSEPTRNYPIETVLSWIRSLNPKIMTVVEQEANHNQPLFLDRFTEALYYYSTMFDSLEAC---TVQPEK 434
                     **************************99999999*************************************************998...578888 PP

            GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaW 373
                      + + +++rei nvv+ceg++r+erhe l+kWr rl++aGFkp++l+++a kqa++ll  ++ +gy+vee++g+l+lgW++rpL+++SaW
  XP_022730215.1 435 ALAEIYIQREIANVVSCEGSARVERHEPLAKWRTRLSAAGFKPLHLGSNAFKQASMLLTLFSAEGYSVEENEGCLTLGWHSRPLIAASAW 524
                     888999************************************************************************************ PP
Sequence ? help Back to Top
Protein Sequence    Length: 543 aa     Download sequence    
MVLCDFATSM GSSSGSSSSS SSKPLPSPQQ QDIDGLLAGA GYKVRSSELL QVAQRLERLE  60
NAMGNSPADF SQLATDAIHY NPSDLGSWVD SLLSEFVQPS TCPSEVIMDP VPNQAVVSNA  120
WTTAEPQNPQ VHQNICYEQQ SLNNQLTVVT ATEEDSGIRL VHMLMTCADC VQRGDLSLAT  180
SLIDDMKGLL TRVNTVCGIG KVAGHFIDAL SGRIYQGIGG GSVNGGSVLE NEILYHHFYE  240
ACPYLKFAHF TANQAILEAF EGHDCVHVVD FNLMHGLQWP ALIQALALRP DGPPLLRLTG  300
IGPPSPDGRD SLREIGLRLA ELARSVNIRF FFRGVAASRL EDVKPWMLRV NPKEAVAVNS  360
IMQLHRLLGS EPTRNYPIET VLSWIRSLNP KIMTVVEQEA NHNQPLFLDR FTEALYYYST  420
MFDSLEACTV QPEKALAEIY IQREIANVVS CEGSARVERH EPLAKWRTRL SAAGFKPLHL  480
GSNAFKQASM LLTLFSAEGY SVEENEGCLT LGWHSRPLIA ASAWHAVPDA SAEFPAWDNQ  540
QSS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14920.11e-166GRAS family protein