PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730239.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family MYB
Protein Properties Length: 307aa    MW: 34474.8 Da    PI: 9.8156
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730239.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding24.56.5e-082874347
                     SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding  3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqky 47
                     +WT  E +++ +a + + ++   +W ++a++++ g+t  +++  ++++
   XP_022730239.1 28 KWTSAENKIFENALAVYDKDtpdRWQKVAAMIP-GKTVGDVIKQYRDL 74
                     8********************************.*******9999875 PP
2Myb_DNA-binding48.22.5e-15135179347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT+eE++l++ + k++G+g+W+ I+r +  +Rt+ q+ s+ qky
   XP_022730239.1 135 PWTEEEHKLFLMGLKKYGKGDWRNISRNFVVTRTPTQVASHAQKY 179
                      8*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    
MKWEMEILSP TSYLSSTNWF IEEGKSTKWT SAENKIFENA LAVYDKDTPD RWQKVAAMIP  60
GKTVGDVIKQ YRDLEADVSS IEAGLVPIPG YNTSPFTLDW VNSHGYDGLK QSYVLGGKRS  120
SSGRPVEQER KKGVPWTEEE HKLFLMGLKK YGKGDWRNIS RNFVVTRTPT QVASHAQKYF  180
IRQLSGGKDK RRASIHDITT VNLNDTRTPS PDNKGAPSPE QSSVLIQQPN SAAMPRTHFQ  240
WNQPCSGATM AFNSTQGNML MSSPYGIPSY GLKMRGQSLH RSVAHESYFG PQNLVFQMQS  300
AQQYPQG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.11e-113MYB_related family protein