PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730410.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 848aa    MW: 94123 Da    PI: 6.8981
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730410.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.5e-24160261199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+lt sd++++g +++ +++a+e+     ++ ++ s++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++
  XP_022730410.1 160 FCKTLTASDTSTHGGFSVLRRHADEClppldMSRQPPSQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENG 252
                     99*****************************444556679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_022730410.1 253 ELRVGVRRA 261
                     9*****996 PP
2Auxin_resp119.62.4e-39286368183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha +t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_022730410.1 286 AWHACTTQTIFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWQDSKWRCLK 368
                     79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 848 aa     Download sequence    
MTTSEVSIKG NCVNGRGESF SSGYSEPNDA RSAMEGQNGH STCTAVVRDP ETALYTELWH  60
ACAGPLVTVP REGERVFYFP QGHIEQVEAS TNQVADQQMP LYNLPSKILC RVINVQLKAE  120
PDTDEVFAQV TLLPEPIQDE NTVGKEPPTP QPPRFLVHSF CKTLTASDTS THGGFSVLRR  180
HADECLPPLD MSRQPPSQEL VAKDLHGNEW RFRHIFRGQP RRHLLQSGWS VFVSSKRLVA  240
GDAFIFLRGE NGELRVGVRR AMRQQGIVPS SVISSHSMHL GVLATAWHAC TTQTIFTVYY  300
KPRTSPAEFI VPFDQYMESV KNNYSIGMRF KMRFEGEEAP EQRFTGTIVG IEDADPQRWQ  360
DSKWRCLKVR WDETTTMPRP ERVSPWKIEP ALAPSALNPL PLPRPKRPRS NAVPSSPDSS  420
VLPREGSSKV TVDPSPAIGF SRVLQGQEFS TLRGNFAESN ESDTAEKSVM WPPVDDEKID  480
VVSAARRFGS ENWVSSGRHE PTCTDLLSGF GSNAGMADQT SVAGNPMRKQ LPDQEGGIGC  540
WSLLPSGLSL KLDKKNAKPP LQGSDVPYQV RGNGRFSGFG DYPMLKGRRI EHSHGNWLMP  600
PPTSSHYENL VHSRDLMPKT SLVQEHENGK SREGNCKLFG IPLISNSVAS EPAVSNINAL  660
NKRVGRPQAP SHQVHTFESD RRSEKSKVSH LAEDLSACNE QDKIFRLGQP QTREVPSKPS  720
NASTRSCTKV HKQGIALVRS VDLTKFNNYG ELIAELDQLF EFGGELMAPK KNWLVVYTDD  780
EGDMMLVGDD PWQEFCAMVR KIGIYTREEV QKMKPGSLSS RGEDNPVSAE GLDAEEVRCP  840
SAFSAGNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein