PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730418.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family ARF
Protein Properties Length: 847aa    MW: 93994.8 Da    PI: 6.8981
Description ARF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730418.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B375.46.5e-24159260199
                     EEEE-..-HHHHTT-EE--HHH.HTT.....---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh.....ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+lt sd++++g +++ +++a+e+     ++ ++ s++l+ +d++g++W++++i+r++++r++l++GW+ Fv++++L +gD ++F   + +++
  XP_022730418.1 159 FCKTLTASDTSTHGGFSVLRRHADEClppldMSRQPPSQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL--RGENG 251
                     99*****************************444556679************************************************..44999 PP

                     ..EEEEE-S CS
              B3  91 elvvkvfrk 99 
                     el+v+v+r+
  XP_022730418.1 252 ELRVGVRRA 260
                     9*****996 PP
2Auxin_resp119.62.4e-39285367183
      Auxin_resp   1 aahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrlsGtvvgvsdldpvrWpnSkWrsLk 83 
                     a+ha +t+++F+v+Y+Pr+s++eF+v+++++++++k+++s+GmRfkm+fe+e+++e+r++Gt+vg++d+dp rW++SkWr+Lk
  XP_022730418.1 285 AWHACTTQTIFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWQDSKWRCLK 367
                     79*******************************************************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 847 aa     Download sequence    
MTTSEVSIKG NCVNGRGESF SSGYSEPNDA RSAMEGQNGH STCTAVVRDP ETALYTELWH  60
ACAGPLVTVP REGERVFYFP QGHIEQVEAS TNQVADQQMP LYNLPSKILC RVINVQLKAE  120
PDTDEVFAQV TLLPEPIDEN TVGKEPPTPQ PPRFLVHSFC KTLTASDTST HGGFSVLRRH  180
ADECLPPLDM SRQPPSQELV AKDLHGNEWR FRHIFRGQPR RHLLQSGWSV FVSSKRLVAG  240
DAFIFLRGEN GELRVGVRRA MRQQGIVPSS VISSHSMHLG VLATAWHACT TQTIFTVYYK  300
PRTSPAEFIV PFDQYMESVK NNYSIGMRFK MRFEGEEAPE QRFTGTIVGI EDADPQRWQD  360
SKWRCLKVRW DETTTMPRPE RVSPWKIEPA LAPSALNPLP LPRPKRPRSN AVPSSPDSSV  420
LPREGSSKVT VDPSPAIGFS RVLQGQEFST LRGNFAESNE SDTAEKSVMW PPVDDEKIDV  480
VSAARRFGSE NWVSSGRHEP TCTDLLSGFG SNAGMADQTS VAGNPMRKQL PDQEGGIGCW  540
SLLPSGLSLK LDKKNAKPPL QGSDVPYQVR GNGRFSGFGD YPMLKGRRIE HSHGNWLMPP  600
PTSSHYENLV HSRDLMPKTS LVQEHENGKS REGNCKLFGI PLISNSVASE PAVSNINALN  660
KRVGRPQAPS HQVHTFESDR RSEKSKVSHL AEDLSACNEQ DKIFRLGQPQ TREVPSKPSN  720
ASTRSCTKVH KQGIALVRSV DLTKFNNYGE LIAELDQLFE FGGELMAPKK NWLVVYTDDE  780
GDMMLVGDDP WQEFCAMVRK IGIYTREEVQ KMKPGSLSSR GEDNPVSAEG LDAEEVRCPS  840
AFSAGNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G62000.30.0ARF family protein