PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730458.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

NF-YC

Protein Properties

Length: 274aa MW: 30711.3 Da PI: 4.6163

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730458.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	55.1	1.7e-17	6	86	18	98
NF-YC 18 nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 ++++P arikki++adedv +i+ +P l+ska elf+ +l r++ + +t++ ++++v+ ++fdfl +iv + XP_022730458.1 6 DTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLLRGAKTVNSLHLKQCVQGFNVFDFLREIVGK 86 5789************************************************************************99865 PP

Sequence ? help Back to Top
Protein Sequence Length: 274 aa Download sequence
MKRKLDTRFP AARIKKIMQA DEDVGKIAMA VPLLVSKALE LFLQDLCDRT YEITLLRGAK 60 TVNSLHLKQC VQGFNVFDFL REIVGKVPDL GGLDAAGEDR SVPKRRKVVD DDQNASDDEP 120 KRSRMHETAH VISCGRGRGR GTGRGRGRGS QITKRDTSAQ CEKFEDDLDI SYFQEKHTLS 180 CERLDDEAEP EELKKHNPAG KNIEAPVRNF DLNADLDENG DSTTSIAPAT TDNIPEKEQL 240 PGWSLSEIEN MAIDPIELAN LSREIDEEDY DEEV

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	136	145	RGRGRGTGRG
2	140	149	RGRGRGTGRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G19490.1	6e-71	NF-YC family protein