PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730470.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

ARF

Protein Properties

Length: 710aa MW: 78291.6 Da PI: 8.3462

Description

ARF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730470.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	73.5	2.5e-23	113	214	1	99
EEEE-..-HHHHTT-EE--HHH.HTT.......---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSS CS B3 1 ffkvltpsdvlksgrlvlpkkfaeeh.......ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrs 88 f k+lt+sd+++ g +++p+ +ae++ ++ + t++ +d +g+ W++++iyr++++r++lt+GW+ Fv++++L +gD++vF + + XP_022730470.1 113 FAKTLTQSDANNGGGFSVPRYCAETIfprldysADPPVQ--TVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFL--RAE 203 89**************************996555555..8********************************************..448 PP EE..EEEEE-S CS B3 89 efelvvkvfrk 99 ++ l+v+++r+ XP_022730470.1 204 NGDLCVGIRRA 214 8999**997 PP
2	Auxin_resp	112.7	3.4e-37	277	359	2	83
Auxin_resp 2 ahaastksvFevvYnPrastseFvvkvekvekalkvkvsvGmRfkmafetedsserrl.sGtvvgvsdldpvrWpnSkWrsLk 83 + a+ +++Fe++Y+Prast+eF+vk++ v++a++++++ GmRfkmafetedss++++ +Gtv++v+++dp+ W+nS+Wr+L+ XP_022730470.1 277 VALAAGGQPFEIIYYPRASTPEFCVKASAVRAAMRIPWCSGMRFKMAFETEDSSRISWfMGTVSSVQAADPIGWRNSPWRLLQ 359 6678899**************************************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 710 aa Download sequence
MKEPVKSLDP QLWHACAGSI VQIPPVNSKV FYFPQGHAEH SLSSVDFSSS PQIPALVLCR 60 VSSVKFLADI ETDEVYAKIM LMPLPNSGRD IEDDVVIGGG SNGSDNVEKP ASFAKTLTQS 120 DANNGGGFSV PRYCAETIFP RLDYSADPPV QTVIAKDVHG EIWKFRHIYR GTPRRHLLTT 180 GWSTFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKRGIGN ELESGAQGWN SGHVNGNCVT 240 PYGGFSAFLR EDESKIMRNG NLRGKGKVRP ESVLGAVALA AGGQPFEIIY YPRASTPEFC 300 VKASAVRAAM RIPWCSGMRF KMAFETEDSS RISWFMGTVS SVQAADPIGW RNSPWRLLQV 360 TWDEPDLLQN VKRVSPWLVE LVSNMSAIHL PPFSPPRKKL RLPQHLDFPV DRQFPMPSFS 420 GNPLGPSSPL RCLSDNAPAG IQGARHAQFG LSLSDLHLNN KLQSGLFRSS FQQFDPHARI 480 ADGIMMARRI NSNDNLSCLL TMGNSSQKEK SDNAKRHQFL LFGQPILTEQ QLSSSCSSET 540 VSQVINRKRS LDGNADKTKD TSDGSGYALE NHFSPEKSST AGFLWHQDYR TTEPGLDTGH 600 CKVFLESEDV GRTLDLSVLG SYEELYRRLA DMFGIERSKI LGHVLYRDAT GAVKQTGDEP 660 FSTFMKTAKR LTIRIDSGND TVERSWLTGM RTAENGLEGP NKTGPLSIFA

Sequence ? help Back to Top

Protein Sequence Length: 710 aa Download sequence

MKEPVKSLDP QLWHACAGSI VQIPPVNSKV FYFPQGHAEH SLSSVDFSSS PQIPALVLCR  60
VSSVKFLADI ETDEVYAKIM LMPLPNSGRD IEDDVVIGGG SNGSDNVEKP ASFAKTLTQS  120
DANNGGGFSV PRYCAETIFP RLDYSADPPV QTVIAKDVHG EIWKFRHIYR GTPRRHLLTT  180
GWSTFVNQKK LVAGDSIVFL RAENGDLCVG IRRAKRGIGN ELESGAQGWN SGHVNGNCVT  240
PYGGFSAFLR EDESKIMRNG NLRGKGKVRP ESVLGAVALA AGGQPFEIIY YPRASTPEFC  300
VKASAVRAAM RIPWCSGMRF KMAFETEDSS RISWFMGTVS SVQAADPIGW RNSPWRLLQV  360
TWDEPDLLQN VKRVSPWLVE LVSNMSAIHL PPFSPPRKKL RLPQHLDFPV DRQFPMPSFS  420
GNPLGPSSPL RCLSDNAPAG IQGARHAQFG LSLSDLHLNN KLQSGLFRSS FQQFDPHARI  480
ADGIMMARRI NSNDNLSCLL TMGNSSQKEK SDNAKRHQFL LFGQPILTEQ QLSSSCSSET  540
VSQVINRKRS LDGNADKTKD TSDGSGYALE NHFSPEKSST AGFLWHQDYR TTEPGLDTGH  600
CKVFLESEDV GRTLDLSVLG SYEELYRRLA DMFGIERSKI LGHVLYRDAT GAVKQTGDEP  660
FSTFMKTAKR LTIRIDSGND TVERSWLTGM RTAENGLEGP NKTGPLSIFA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28350.1	0.0	ARF family protein