PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_022730498.1

Organism

Durio zibethinus

Taxonomic ID

66656

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio

Family

MYB_related

Protein Properties

Length: 672aa MW: 70928.2 Da PI: 6.4511

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_022730498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.4	1.6e-08	204	248	1	44
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT.TTS-HHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg.kgRtlkqcksrw 44 r++W++ Ed l+ av++ G g+W+ I r +Rt+ q+ rw XP_022730498.1 204 RKPWSEAEDMELIAAVQKCGVGNWANILRGDFkGNRTAAQLAQRW 248 789**********************9842236********9 PP

Sequence ? help Back to Top
Protein Sequence Length: 672 aa Download sequence
MIEKTKKQKK GSISEEDIST ILQRYTATTI LALLQEVAQF PGVKLNWNAL VKKTSTGISN 60 AREYQMLWHH LAYRDALLEK LEDGAEPLDD DSDLEYELER CPSVSSEASA EAAACVKVLI 120 ASGLPSDSSR ANSSTVEASL RINVPNVQSF RVSSENSQHT CSMQGTNITV PVSVQKQILP 180 AVTSAETLEG SGSAGVNQSS RRKRKPWSEA EDMELIAAVQ KCGVGNWANI LRGDFKGNRT 240 AAQLAQRWTI IKKRLVNLNV EGNSTIPQLS EAQLATRSAL SLALDMPDKN LTAACTNNPG 300 LKPSSSNPAL PTTSGEASVQ AQNQSQQGPI TSVSTHNQPQ KGPITYVPAQ NLSQQGPVAS 360 VQVPNQSQQG PMTTKTSPRG PSASTLKSRV SLKKPPAKSF PCTGSILDAT AVAAGARIGS 420 PEAAAFLLKA AQSKNAIHIM ASGGSSVKPL MPGGTSSHLE VHSNVQYVST GLTAEPVSSP 480 VVSSSTLHPG SVKSATYRVE HTPASSSLLN ASTQQCNAVT SGPTVEGPLK EEIEAALEIK 540 GSVSDSLPKE QVQENGACVS KNEPGEGVKE HKAAASNPNE FKDLEAVAEH PNGTLMVESD 600 QVDVTANLVE ESQTGNDSKI DYSLVKKSDN QPAAEESSRN QSMIKSPAEA SLNDGSTKNL 660 EVLSKAETGQ AK

Sequence ? help Back to Top

Protein Sequence Length: 672 aa Download sequence

MIEKTKKQKK GSISEEDIST ILQRYTATTI LALLQEVAQF PGVKLNWNAL VKKTSTGISN  60
AREYQMLWHH LAYRDALLEK LEDGAEPLDD DSDLEYELER CPSVSSEASA EAAACVKVLI  120
ASGLPSDSSR ANSSTVEASL RINVPNVQSF RVSSENSQHT CSMQGTNITV PVSVQKQILP  180
AVTSAETLEG SGSAGVNQSS RRKRKPWSEA EDMELIAAVQ KCGVGNWANI LRGDFKGNRT  240
AAQLAQRWTI IKKRLVNLNV EGNSTIPQLS EAQLATRSAL SLALDMPDKN LTAACTNNPG  300
LKPSSSNPAL PTTSGEASVQ AQNQSQQGPI TSVSTHNQPQ KGPITYVPAQ NLSQQGPVAS  360
VQVPNQSQQG PMTTKTSPRG PSASTLKSRV SLKKPPAKSF PCTGSILDAT AVAAGARIGS  420
PEAAAFLLKA AQSKNAIHIM ASGGSSVKPL MPGGTSSHLE VHSNVQYVST GLTAEPVSSP  480
VVSSSTLHPG SVKSATYRVE HTPASSSLLN ASTQQCNAVT SGPTVEGPLK EEIEAALEIK  540
GSVSDSLPKE QVQENGACVS KNEPGEGVKE HKAAASNPNE FKDLEAVAEH PNGTLMVESD  600
QVDVTANLVE ESQTGNDSKI DYSLVKKSDN QPAAEESSRN QSMIKSPAEA SLNDGSTKNL  660
EVLSKAETGQ AK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G09710.1	5e-68	MYB_related family protein