PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730510.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GRAS
Protein Properties Length: 711aa    MW: 80196.6 Da    PI: 6.6306
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730510.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS401.86.9e-1233387073374
            GRAS   3 elLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfshlt 97 
                     + L++cA+av+++d++ a+ lL+++s+++s +gd +qRla+yf++AL++rla+++   y++l +++ts    +e l+a+++++ ++P+ k+s++ 
  XP_022730510.1 338 SFLIQCAQAVANNDQRTANVLLKQISQHSSASGDGTQRLAHYFANALKTRLAGMGAPSYSTLLSNRTS---AAEILKAYRVYVLACPFKKMSNFY 429
                     579********************************************************999888887...8*********************** PP

            GRAS  98 aNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrledle 190
                     aN+ I+e +e+++++Hi+Df+i +G+QWp+L+q L++R++gpp+lRiTg++ p++g   +e++eetg+rL++++e+++vpfe+nv +ak++e+++
  XP_022730510.1 430 ANKKIMEVAEKATTLHIVDFGICYGFQWPCLIQRLSARAGGPPKLRITGIEFPQPGfrPAERVEETGRRLKRYCERFNVPFEYNV-IAKKWETIQ 523
                     *******************************************************9****************************9.7******** PP

            GRAS 191 leeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerikv 285
                     l+eL++k++Ea++Vn++++l++l+d++v+ +s+rd+vLkl++s++P+++++v  +  +n++ F++rf eal ++sa fd +ea+++re+ +r++ 
  XP_022730510.1 524 LQELKIKEDEAVVVNCMHRLKNLPDDTVAPTSARDTVLKLIRSINPELFILVTANGTYNAPFFVTRFREALFHFSAQFDIFEANVSREDPQRMMF 618
                     *********************************************************************************************** PP

            GRAS 286 ErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     E+e+lg++i+nvvaceg+er+er e +++W++r+ +aGFk+v+l+++  k++  +++  + + + v+ +  ++++gWk+r ++++S+W+
  XP_022730510.1 619 EKEVLGKDIMNVVACEGSERVERPEAYKQWQARILRAGFKQVSLDQEHLKKVMNMVQSSYHRDFAVDVDGRWMLQGWKGRVIYALSCWK 707
                     ************************************************************999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 711 aa     Download sequence    
MDTLFKDFPS SMYGLKFDHV SVPVHSNHIL AKGFIESPEQ IVPSPPSIPT SPESPVDSAS  60
SSGMSSDGHP LDNVPFANEM LKYINEMLME EDLEEKTCML QDCLALQAAE KSFYEVLGHE  120
YPLSADSISA CTGKNYYNPD DNLTHSRSIG SSDSYTTATN SAEPSRIYSP DEFNSSYIQT  180
SLIDSLERTS LFPDLQIETT IEPFRHFGRD VGKASTSPLN DDKVLLAPES NQLSRLSVPD  240
VRYQSPSRSR GRKSYQREDG DYLEEGRSNK QSALSLEDSE QSEMFDEVLL CKGENEDSTI  300
GSLNGNSQQN GLLKGSVNGR TTRRKKNGKK SEVVDLWSFL IQCAQAVANN DQRTANVLLK  360
QISQHSSASG DGTQRLAHYF ANALKTRLAG MGAPSYSTLL SNRTSAAEIL KAYRVYVLAC  420
PFKKMSNFYA NKKIMEVAEK ATTLHIVDFG ICYGFQWPCL IQRLSARAGG PPKLRITGIE  480
FPQPGFRPAE RVEETGRRLK RYCERFNVPF EYNVIAKKWE TIQLQELKIK EDEAVVVNCM  540
HRLKNLPDDT VAPTSARDTV LKLIRSINPE LFILVTANGT YNAPFFVTRF REALFHFSAQ  600
FDIFEANVSR EDPQRMMFEK EVLGKDIMNV VACEGSERVE RPEAYKQWQA RILRAGFKQV  660
SLDQEHLKKV MNMVQSSYHR DFAVDVDGRW MLQGWKGRVI YALSCWKPVR N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.10.0GRAS family protein