PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730547.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family GATA
Protein Properties Length: 339aa    MW: 36943.4 Da    PI: 7.7368
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730547.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA596.3e-19254288135
            GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                     C +C +tkTp+WR+gp g+ktLCnaCG++yr+ +l
  XP_022730547.1 254 CMHCEVTKTPQWREGPLGPKTLCNACGVRYRSGRL 288
                     99*****************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MSNSWFDKCF DGVNDDFFDD VIKCLDFPLE DVEGTDSGGS EEDVKIFHLP LDDVEENNGG  60
GEEWDCNFQN LEPPPANVLA GLSSGFYGDF FSDSLAKNLN VSCDGSSQLN QLSSTTKASS  120
GRSITLHSES TDVKGSTRFQ TSSPVSVLES SSSYSGANLT PINPKLDFLV KRGRSKRRRA  180
STFNLQFTLP FISSASSTSG GSNSLVGSES ESESHLMEKT AKKRQKKQKN LILLSGSSEI  240
KNSPSQQPLV VRKCMHCEVT KTPQWREGPL GPKTLCNACG VRYRSGRLLP EYRPAASPTF  300
VPSLHSNSHK KVVEMRKKAK LPTTVTPSVL SIPPQISFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G08010.24e-46GATA family protein