PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730555.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family TCP
Protein Properties Length: 198aa    MW: 21578.5 Da    PI: 9.9162
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730555.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP106.54.1e-3340112666
             TCP   6 drhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt............s 66 
                     ++++++h+kv+gRdRR+Rl+  caar+F+L++eLG+++d++ti WLl+qa+p+i+++tgt            s
  XP_022730555.1  40 KTTKDRHAKVDGRDRRIRLPPVCAARIFQLTRELGHKTDGETIAWLLRQAEPSIIAATGTginlpsdttpalS 112
                     789*********************************************************7666654333330 PP
Sequence ? help Back to Top
Protein Sequence    Length: 198 aa     Download sequence    
MASKNMGLEM PLSNPSTRKP RSFSQNKPST SKNKLVSSSK TTKDRHAKVD GRDRRIRLPP  60
VCAARIFQLT RELGHKTDGE TIAWLLRQAE PSIIAATGTG INLPSDTTPA LSTPTGLVPF  120
SSGSPLLSSD YSPSLNFSQA KVFSDNKDKL KNCVVSRAEP TLPPFEFDLV ANFELEFSAN  180
EIALLQSVTG CHDKEGKF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08330.11e-33TCP family protein