PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_022730558.1
Organism
Durio zibethinus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Malvales; Malvaceae; Helicteroideae; Durio
Family LBD
Protein Properties Length: 210aa    MW: 22781.8 Da    PI: 5.7511
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_022730558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260136.97.5e-43491481100
          DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 
                     +CaaCk+lrr+Ca++Cvlapyfp ++p+kf ++h++FGasn++k+l++lpe++r da+ss+vyeA ar+rdPvyG++g i +lq+q+++l+a+la
  XP_022730558.1  49 PCAACKILRRRCADKCVLAPYFPPTEPAKFTIAHRVFGASNIIKFLQELPESQRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNELQAQLA 143
                     7********************************************************************************************** PP

          DUF260  96 llkee 100
                     ++++e
  XP_022730558.1 144 KAQAE 148
                     99976 PP
Sequence ? help Back to Top
Protein Sequence    Length: 210 aa     Download sequence    
MFKMEYSEAT PATISSPQSL SPNNSSNSSS SPPPPPTSNT PTPPAVISPC AACKILRRRC  60
ADKCVLAPYF PPTEPAKFTI AHRVFGASNI IKFLQELPES QRADAVSSMV YEASARIRDP  120
VYGCAGAICQ LQKQVNELQA QLAKAQAEVV NMQLQQANLV ALLCMEVAQS PQPNSQQSVD  180
TFISSPQSHQ SNPSFMEDNN LGSLWEPLWT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28500.15e-72LBD family protein